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Implement Roadie for channel extraction #62

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kbestak opened this issue Oct 25, 2024 · 0 comments
Open

Implement Roadie for channel extraction #62

kbestak opened this issue Oct 25, 2024 · 0 comments
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enhancement Improvement for existing functionality

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kbestak commented Oct 25, 2024 •
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Description of feature

Initially as a local module, then it can be moved to nf-core.

Similarly as in legacy MCMICRO, channels for segmentation need to be extracted and provided to segmentation tools as not all of them can read specific channels only - e.g. Mesmer would load the whole image into memory.
@kbestak kbestak added the enhancement Improvement for existing functionality label Oct 25, 2024
@kbestak kbestak self-assigned this Nov 4, 2024
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enhancement Improvement for existing functionality
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