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Releases: nf-core/proteinfamilies

Iron Rhinoceros

17 Feb 09:22
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Initial release of nf-core/proteinfamilies, created with the nf-core template.

Added

  • Amino acid sequence clustering (mmseqs)
  • Multiple sequence alignment (famsa, mafft, clipkit)
  • Hidden Markov Model generation (hmmer)
  • Between families redundancy removal (hmmer)
  • In-family sequence redundancy removal (mmseqs)
  • Family updating (hmmer, seqkit, mmseqs, famsa, mafft, clipkit)
  • Family statistics presentation (multiqc)

By @vagkaratzas and @mberacochea.