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Dev -> Master for 3.16.1 #3071

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Dev -> Master for 3.16.1

Dev -> Master for 3.16.1 #3071

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24s
Run tests (subworkflows/nf-core/fastq_qc_trim_filter_setstrandedness/tests/main.nf.test conda NF-24.04.2)
4m 38s
Run tests (subworkflows/nf-core/fastq_qc_trim_filter_setstrandedness/tests/main.nf.test docker NF-24.04.2)
3m 46s
Run tests (subworkflows/nf-core/fastq_qc_trim_filter_setstrandedness/tests/main.nf.test singularity NF-24.04.2)
3m 29s
Run tests (subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.function.nf.test conda NF-24.04.2)
7m 9s
Run tests (subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.function.nf.test docker NF-24.04.2)
8m 43s
Run tests (subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.function.nf.test singularity NF-24.04.2)
6m 51s
Run tests (tests/skip_qc.nf.test docker NF-24.04.2)
13m 3s
Run tests (tests/skip_qc.nf.test singularity NF-24.04.2)
9m 52s
Run tests (tests/featurecounts_group_type.nf.test docker NF-24.04.2)
13m 21s
Run tests (tests/featurecounts_group_type.nf.test singularity NF-24.04.2)
12m 5s
Run tests (subworkflows/nf-core/utils_nextflow_pipeline/tests/main.function.nf.test conda NF-24.04.2)
4m 33s
Run tests (subworkflows/nf-core/utils_nextflow_pipeline/tests/main.function.nf.test docker NF-24.04.2)
3m 34s
Run tests (subworkflows/nf-core/utils_nextflow_pipeline/tests/main.function.nf.test singularity NF-24.04.2)
2m 53s
Run tests (tests/skip_trimming.nf.test docker NF-24.04.2)
15m 48s
Run tests (tests/skip_trimming.nf.test singularity NF-24.04.2)
13m 38s
Run tests (subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.pipeline_initialisation.workflow.nf.test conda NF-24.04.2)
3m 6s
Run tests (subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.pipeline_initialisation.workflow.nf.test docker NF-24.04.2)
2m 42s
Run tests (subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.pipeline_initialisation.workflow.nf.test singularity NF-24.04.2)
3m 16s
Run tests (subworkflows/nf-core/utils_nfschema_plugin/tests/main.nf.test conda NF-24.04.2)
3m 21s
Run tests (subworkflows/nf-core/utils_nfschema_plugin/tests/main.nf.test docker NF-24.04.2)
3m 0s
Run tests (subworkflows/nf-core/utils_nfschema_plugin/tests/main.nf.test singularity NF-24.04.2)
3m 56s
Run tests (modules/nf-core/multiqc/tests/main.nf.test conda NF-24.04.2)
7m 12s
Run tests (modules/nf-core/multiqc/tests/main.nf.test docker NF-24.04.2)
4m 21s
Run tests (modules/nf-core/multiqc/tests/main.nf.test singularity NF-24.04.2)
3m 39s
Run tests (modules/nf-core/trimgalore/tests/main.nf.test conda NF-24.04.2)
4m 31s
Run tests (modules/nf-core/trimgalore/tests/main.nf.test docker NF-24.04.2)
3m 30s
Run tests (modules/nf-core/trimgalore/tests/main.nf.test singularity NF-24.04.2)
5m 49s
Run tests (tests/star_rsem.nf.test docker NF-24.04.2)
17m 15s
Run tests (tests/star_rsem.nf.test singularity NF-24.04.2)
16m 33s
Run tests (tests/min_mapped_reads.nf.test docker NF-24.04.2)
13m 21s
Run tests (tests/min_mapped_reads.nf.test singularity NF-24.04.2)
11m 42s
Run tests (subworkflows/nf-core/utils_nfcore_pipeline/tests/main.workflow.nf.test conda NF-24.04.2)
4m 19s
Run tests (subworkflows/nf-core/utils_nfcore_pipeline/tests/main.workflow.nf.test docker NF-24.04.2)
2m 19s
Run tests (subworkflows/nf-core/utils_nfcore_pipeline/tests/main.workflow.nf.test singularity NF-24.04.2)
4m 46s
Run tests (subworkflows/nf-core/fastq_qc_trim_filter_setstrandedness/tests/main.function.nf.test conda NF-24.04.2)
3m 51s
Run tests (subworkflows/nf-core/fastq_qc_trim_filter_setstrandedness/tests/main.function.nf.test docker NF-24.04.2)
4m 30s
Run tests (subworkflows/nf-core/fastq_qc_trim_filter_setstrandedness/tests/main.function.nf.test singularity NF-24.04.2)
5m 22s
Run tests (tests/salmon.nf.test docker NF-24.04.2)
7m 49s
Run tests (tests/salmon.nf.test singularity NF-24.04.2)
8m 54s
Run tests (subworkflows/nf-core/utils_nextflow_pipeline/tests/main.workflow.nf.test conda NF-24.04.2)
6m 0s
Run tests (subworkflows/nf-core/utils_nextflow_pipeline/tests/main.workflow.nf.test docker NF-24.04.2)
4m 29s
Run tests (subworkflows/nf-core/utils_nextflow_pipeline/tests/main.workflow.nf.test singularity NF-24.04.2)
3m 4s
Run tests (modules/nf-core/fastqc/tests/main.nf.test conda NF-24.04.2)
6m 45s
Run tests (modules/nf-core/fastqc/tests/main.nf.test docker NF-24.04.2)
7m 3s
Run tests (modules/nf-core/fastqc/tests/main.nf.test singularity NF-24.04.2)
5m 12s
Run tests (tests/default.nf.test docker NF-24.04.2)
14m 9s
Run tests (tests/default.nf.test singularity NF-24.04.2)
13m 0s
Run tests (tests/kallisto.nf.test docker NF-24.04.2)
10m 22s
Run tests (tests/kallisto.nf.test singularity NF-24.04.2)
14m 18s
Run tests (subworkflows/nf-core/fastq_fastqc_umitools_trimgalore/tests/main.nf.test conda NF-24.04.2)
9m 47s
Run tests (subworkflows/nf-core/fastq_fastqc_umitools_trimgalore/tests/main.nf.test docker NF-24.04.2)
6m 55s
Run tests (subworkflows/nf-core/fastq_fastqc_umitools_trimgalore/tests/main.nf.test singularity NF-24.04.2)
7m 37s
Run tests (subworkflows/nf-core/utils_nfcore_pipeline/tests/main.function.nf.test conda NF-24.04.2)
3m 47s
Run tests (subworkflows/nf-core/utils_nfcore_pipeline/tests/main.function.nf.test docker NF-24.04.2)
3m 40s
Run tests (subworkflows/nf-core/utils_nfcore_pipeline/tests/main.function.nf.test singularity NF-24.04.2)
3m 29s
Run tests (subworkflows/nf-core/fastq_fastqc_umitools_fastp/tests/main.nf.test conda NF-24.04.2)
11m 11s
Run tests (subworkflows/nf-core/fastq_fastqc_umitools_fastp/tests/main.nf.test docker NF-24.04.2)
7m 19s
Run tests (subworkflows/nf-core/fastq_fastqc_umitools_fastp/tests/main.nf.test singularity NF-24.04.2)
7m 34s
Run tests (tests/hisat2.nf.test docker NF-24.04.2)
11m 29s
Run tests (tests/hisat2.nf.test singularity NF-24.04.2)
10m 3s
Run tests (subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.pipeline_completion.workflow.nf.test conda NF-24.04.2)
3m 17s
Run tests (subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.pipeline_completion.workflow.nf.test docker NF-24.04.2)
2m 41s
Run tests (subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.pipeline_completion.workflow.nf.test singularity NF-24.04.2)
4m 51s
Run tests (modules/nf-core/umitools/extract/tests/main.nf.test conda NF-24.04.2)
6m 12s
Run tests (modules/nf-core/umitools/extract/tests/main.nf.test docker NF-24.04.2)
3m 37s
Run tests (modules/nf-core/umitools/extract/tests/main.nf.test singularity NF-24.04.2)
3m 57s
Run tests (tests/remove_ribo_rna.nf.test docker NF-24.04.2)
18m 39s
Run tests (tests/remove_ribo_rna.nf.test singularity NF-24.04.2)
23m 32s
Run tests (subworkflows/nf-core/fastq_qc_trim_filter_setstrandedness/tests/main.nf.test conda NF-latest-everything)
6m 43s
Run tests (subworkflows/nf-core/fastq_qc_trim_filter_setstrandedness/tests/main.nf.test docker NF-latest-everything)
5m 19s
Run tests (subworkflows/nf-core/fastq_qc_trim_filter_setstrandedness/tests/main.nf.test singularity NF-latest-everything)
4m 5s
Run tests (subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.function.nf.test conda NF-latest-everything)
6m 30s
Run tests (subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.function.nf.test docker NF-latest-everything)
8m 22s
Run tests (subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.function.nf.test singularity NF-latest-everything)
6m 23s
Run tests (tests/skip_qc.nf.test docker NF-latest-everything)
11m 8s
Run tests (tests/skip_qc.nf.test singularity NF-latest-everything)
13m 32s
Run tests (tests/featurecounts_group_type.nf.test docker NF-latest-everything)
13m 44s
Run tests (tests/featurecounts_group_type.nf.test singularity NF-latest-everything)
14m 59s
Run tests (subworkflows/nf-core/utils_nextflow_pipeline/tests/main.function.nf.test conda NF-latest-everything)
3m 1s
Run tests (subworkflows/nf-core/utils_nextflow_pipeline/tests/main.function.nf.test docker NF-latest-everything)
2m 46s
Run tests (subworkflows/nf-core/utils_nextflow_pipeline/tests/main.function.nf.test singularity NF-latest-everything)
3m 6s
Run tests (tests/skip_trimming.nf.test docker NF-latest-everything)
12m 31s
Run tests (tests/skip_trimming.nf.test singularity NF-latest-everything)
14m 48s
Run tests (subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.pipeline_initialisation.workflow.nf.test conda NF-latest-everything)
3m 3s
Run tests (subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.pipeline_initialisation.workflow.nf.test docker NF-latest-everything)
4m 53s
Run tests (subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.pipeline_initialisation.workflow.nf.test singularity NF-latest-everything)
4m 40s
Run tests (subworkflows/nf-core/utils_nfschema_plugin/tests/main.nf.test conda NF-latest-everything)
4m 36s
Run tests (subworkflows/nf-core/utils_nfschema_plugin/tests/main.nf.test docker NF-latest-everything)
3m 1s
Run tests (subworkflows/nf-core/utils_nfschema_plugin/tests/main.nf.test singularity NF-latest-everything)
2m 40s
Run tests (modules/nf-core/multiqc/tests/main.nf.test conda NF-latest-everything)
5m 12s
Run tests (modules/nf-core/multiqc/tests/main.nf.test docker NF-latest-everything)
3m 32s
Run tests (modules/nf-core/multiqc/tests/main.nf.test singularity NF-latest-everything)
3m 11s
Run tests (modules/nf-core/trimgalore/tests/main.nf.test conda NF-latest-everything)
4m 11s
Run tests (modules/nf-core/trimgalore/tests/main.nf.test docker NF-latest-everything)
3m 14s
Run tests (modules/nf-core/trimgalore/tests/main.nf.test singularity NF-latest-everything)
5m 26s
Run tests (tests/star_rsem.nf.test docker NF-latest-everything)
13m 33s
Run tests (tests/star_rsem.nf.test singularity NF-latest-everything)
13m 59s
Run tests (tests/min_mapped_reads.nf.test docker NF-latest-everything)
15m 42s
Run tests (tests/min_mapped_reads.nf.test singularity NF-latest-everything)
11m 31s
Run tests (subworkflows/nf-core/utils_nfcore_pipeline/tests/main.workflow.nf.test conda NF-latest-everything)
5m 17s
Run tests (subworkflows/nf-core/utils_nfcore_pipeline/tests/main.workflow.nf.test docker NF-latest-everything)
4m 9s
Run tests (subworkflows/nf-core/utils_nfcore_pipeline/tests/main.workflow.nf.test singularity NF-latest-everything)
6m 38s
Run tests (subworkflows/nf-core/fastq_qc_trim_filter_setstrandedness/tests/main.function.nf.test conda NF-latest-everything)
4m 59s
Run tests (subworkflows/nf-core/fastq_qc_trim_filter_setstrandedness/tests/main.function.nf.test docker NF-latest-everything)
2m 43s
Run tests (subworkflows/nf-core/fastq_qc_trim_filter_setstrandedness/tests/main.function.nf.test singularity NF-latest-everything)
2m 59s
Run tests (tests/salmon.nf.test docker NF-latest-everything)
7m 39s
Run tests (tests/salmon.nf.test singularity NF-latest-everything)
9m 54s
Run tests (subworkflows/nf-core/utils_nextflow_pipeline/tests/main.workflow.nf.test conda NF-latest-everything)
5m 12s
Run tests (subworkflows/nf-core/utils_nextflow_pipeline/tests/main.workflow.nf.test docker NF-latest-everything)
13m 26s
Run tests (subworkflows/nf-core/utils_nextflow_pipeline/tests/main.workflow.nf.test singularity NF-latest-everything)
4m 16s
Run tests (modules/nf-core/fastqc/tests/main.nf.test conda NF-latest-everything)
8m 53s
Run tests (modules/nf-core/fastqc/tests/main.nf.test docker NF-latest-everything)
5m 17s
Run tests (modules/nf-core/fastqc/tests/main.nf.test singularity NF-latest-everything)
6m 58s
Run tests (tests/default.nf.test docker NF-latest-everything)
13m 29s
Run tests (tests/default.nf.test singularity NF-latest-everything)
17m 21s
Run tests (tests/kallisto.nf.test docker NF-latest-everything)
7m 27s
Run tests (tests/kallisto.nf.test singularity NF-latest-everything)
7m 41s
Run tests (subworkflows/nf-core/fastq_fastqc_umitools_trimgalore/tests/main.nf.test conda NF-latest-everything)
6m 58s
Run tests (subworkflows/nf-core/fastq_fastqc_umitools_trimgalore/tests/main.nf.test docker NF-latest-everything)
4m 42s
Run tests (subworkflows/nf-core/fastq_fastqc_umitools_trimgalore/tests/main.nf.test singularity NF-latest-everything)
4m 54s
Run tests (subworkflows/nf-core/utils_nfcore_pipeline/tests/main.function.nf.test conda NF-latest-everything)
3m 33s
Run tests (subworkflows/nf-core/utils_nfcore_pipeline/tests/main.function.nf.test docker NF-latest-everything)
3m 18s
Run tests (subworkflows/nf-core/utils_nfcore_pipeline/tests/main.function.nf.test singularity NF-latest-everything)
4m 56s
Run tests (subworkflows/nf-core/fastq_fastqc_umitools_fastp/tests/main.nf.test conda NF-latest-everything)
10m 22s
Run tests (subworkflows/nf-core/fastq_fastqc_umitools_fastp/tests/main.nf.test docker NF-latest-everything)
9m 8s
Run tests (subworkflows/nf-core/fastq_fastqc_umitools_fastp/tests/main.nf.test singularity NF-latest-everything)
8m 57s
Run tests (tests/hisat2.nf.test docker NF-latest-everything)
11m 17s
Run tests (tests/hisat2.nf.test singularity NF-latest-everything)
17m 47s
Run tests (subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.pipeline_completion.workflow.nf.test conda NF-latest-everything)
2m 52s
Run tests (subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.pipeline_completion.workflow.nf.test docker NF-latest-everything)
4m 32s
Run tests (subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.pipeline_completion.workflow.nf.test singularity NF-latest-everything)
2m 42s
Run tests (modules/nf-core/umitools/extract/tests/main.nf.test conda NF-latest-everything)
7m 42s
Run tests (modules/nf-core/umitools/extract/tests/main.nf.test docker NF-latest-everything)
3m 30s
Run tests (modules/nf-core/umitools/extract/tests/main.nf.test singularity NF-latest-everything)
6m 48s
Run tests (tests/remove_ribo_rna.nf.test docker NF-latest-everything)
18m 15s
Run tests (tests/remove_ribo_rna.nf.test singularity NF-latest-everything)
15m 40s
confirm-pass
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