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Merge pull request #1068 from nf-core/update_untar #1863

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Merge pull request #1068 from nf-core/update_untar

Merge pull request #1068 from nf-core/update_untar #1863

Run time

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Job Run time
Run pipeline with test data (23.04.0)
26m 46s
Run pipeline with test data (latest-everything)
20m 36s
Test HISAT2 with workflow parameters (--skip_qc)
9m 58s
Test HISAT2 with workflow parameters (--hisat2_index false)
17m 19s
Test STAR RSEM with workflow parameters (--skip_qc)
13m 39s
Test STAR RSEM with workflow parameters (--rsem_index false)
22m 11s
Test STAR Salmon with workflow parameters (--skip_qc)
15m 44s
Test STAR Salmon with workflow parameters (--skip_trimming)
23m 22s
Test STAR Salmon with workflow parameters (--gtf false)
19m 41s
Test STAR Salmon with workflow parameters (--star_index false)
19m 24s
Test STAR Salmon with workflow parameters (--transcript_fasta false)
19m 54s
Test STAR Salmon with workflow parameters (--min_mapped_reads 90)
19m 32s
Test STAR Salmon with workflow parameters (--with_umi)
26m 38s
Test STAR Salmon with workflow parameters (--with_umi --skip_trimming)
21m 11s
Test STAR Salmon with workflow parameters (--remove_ribo_rna --skip_qualimap)
36m 8s
Test STAR Salmon with workflow parameters (--bam_csi_index)
18m 59s
Test STAR Salmon with workflow parameters (--save_align_intermeds --save_reference)
19m 15s
Test STAR Salmon with workflow parameters (--featurecounts_group_type false)
20m 56s
Test STAR Salmon with workflow parameters (--trimmer fastp)
19m 36s
Test Salmon with workflow parameters (--skip_qc)
19m 3s
Test Salmon with workflow parameters (--skip_alignment --skip_pseudo_alignment)
6m 13s
Test Salmon with workflow parameters (--salmon_index false --transcript_fasta false)
19m 43s
7h 15m 48s