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Important! Template update for nf-core/tools v3.0.1 #3020

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Important! Template update for nf-core/tools v3.0.1

Important! Template update for nf-core/tools v3.0.1 #3020

GitHub Actions / JUnit Test Report failed Oct 9, 2024 in 0s

4 tests run, 3 passed, 0 skipped, 1 failed.

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Check failure on line 1 in Should validate params

See this annotation in the file changed.

@github-actions github-actions / JUnit Test Report

Should validate params 

Assertion failed: 

1 of 2 assertions failed
Raw output 
Nextflow stdout:

N E X T F L O W  ~  version 24.09.0-edge
Launching `/home/runner/work/rnaseq/rnaseq/~/tests/1990db1e95ade1d6efe94817bde92f2/meta/mock.nf` [insane_liskov] DSL2 - revision: f5a646b73c
Could not read parameters settings from JSON. java.nio.file.NoSuchFileException: /home/runner/work/rnaseq/rnaseq/~/tests/1990db1e95ade1d6efe94817bde92f2/meta/home/runner/work/rnaseq/rnaseq/~/tests/1990db1e95ade1d6efe94817bde92f2/meta/subworkflows/nf-core/utils_nfschema_plugin/tests/nextflow_schema.json

------------------------------------------------------
                                        ,--./,-.
        ___     __   __   __   ___     /,-._.--~'
  |\ | |__  __ /  ` /  \ |__) |__         }  {
  | \| |       \__, \__/ |  \ |___     \`-._,-`-,
                                        `._,._,'
  nf-core/rnaseq 3.17.0dev
------------------------------------------------------
Core Nextflow options
  runName        : insane_liskov
  containerEngine: docker
  launchDir      : /home/runner/work/rnaseq/rnaseq/~/tests/1990db1e95ade1d6efe94817bde92f2
  workDir        : /home/runner/work/rnaseq/rnaseq/~/tests/1990db1e95ade1d6efe94817bde92f2/work
  projectDir     : /home/runner/work/rnaseq/rnaseq/~/tests/1990db1e95ade1d6efe94817bde92f2/meta
  userName       : runner
  profile        : test,docker
  configFiles    : 

!! Only displaying parameters that differ from the pipeline defaults !!
------------------------------------------------------* The pipeline
  https://doi.org/10.5281/zenodo.1400710

* The nf-core framework
    https://doi.org/10.1038/s41587-020-0439-x

* Software dependencies
    https://github.com/nf-core/rnaseq/blob/master/CITATIONS.md

ERROR ~ No such file or directory: /home/runner/work/rnaseq/rnaseq/~/tests/1990db1e95ade1d6efe94817bde92f2/meta/home/runner/work/rnaseq/rnaseq/~/tests/1990db1e95ade1d6efe94817bde92f2/meta/subworkflows/nf-core/utils_nfschema_plugin/tests/nextflow_schema.json

 -- Check script '/home/runner/work/rnaseq/rnaseq/subworkflows/nf-core/utils_nfschema_plugin/tests/../main.nf' at line: 39 or see '/home/runner/work/rnaseq/rnaseq/~/tests/1990db1e95ade1d6efe94817bde92f2/meta/nextflow.log' file for more details
Nextflow stderr:
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