Add Points2Regions module with clustering and plotting templates #61
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kubranarci
reviewed
Mar 25, 2025
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| FROM python:3.10-slim | |||
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Is this the docker used to generate container?
modules/local/points2regions/main.nf
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| process POINTS2REGIONS_PLOT { |
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You should generate a second directory points2_regions/plot/main.nf and add this part there
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#Summary
This PR introduces the Points2Regions module for spatial clustering and visualization of transcript data. It includes:
Parameterized smoothing and number of clusters.
Python logic (cluster + plot) placed under modules/local/points2region/templates/
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