update fastp module #1333

Job	Run time
Test SISPA workflow (--gff false)	14m 4s
Test SISPA workflow (--genome 'NC_045512.2')	13m 38s
Run pipeline with test data (23.04.0)	25m 6s
Test Nanopore workflow (--gff false --freyja_depthcutoff 1)	31m 39s
Test workflow parameters (--consensus_caller ivar)	25m 30s
Test Nanopore workflow (--additional_annotation ./GCA_009858895.3_ASM985889v3_genomic.gtf.gz --fr...	25m 39s
Run pipeline with test data (latest-everything)	25m 18s
Test workflow parameters (--variant_caller bcftools --consensus_caller ivar)	23m 25s
Test Nanopore workflow (--input false --freyja_depthcutoff 1)	25m 46s
Test workflow parameters (--skip_fastp --skip_pangolin)	26m 15s
Test Nanopore workflow (--min_barcode_reads 10000)	1m 47s
Test workflow parameters (--skip_variants)	8m 47s
Test Nanopore workflow (--min_guppyplex_reads 10000)	3m 38s
Test workflow parameters (--skip_cutadapt --skip_snpeff)	21m 19s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false...	32m 1s
Test workflow parameters (--skip_kraken2)	27m 9s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false...	32m 22s
Test workflow parameters (--skip_assembly)	21m 36s
Test workflow parameters (--spades_mode corona)	25m 9s
Test workflow parameters (--spades_mode metaviral)	25m 51s
Test workflow parameters (--skip_plasmidid false --skip_asciigenome)	25m 24s
Test workflow parameters (--additional_annotation ./GCA_009858895.3_ASM985889v3_genomic.gtf.gz)	24m 8s
	8h 5m 31s

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