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remove coverage action and add jsdgam tests #151

remove coverage action and add jsdgam tests

remove coverage action and add jsdgam tests #151

# Workflow derived from https://github.com/r-lib/actions/tree/master/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: [main, master]
pull_request:
branches: [main, master]
name: R-CMD-check-rstan
jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}
name: ${{ matrix.config.os }} (${{ matrix.config.r }})
strategy:
fail-fast: false
matrix:
config:
- {os: macos-latest, r: 'release'}
- {os: windows-latest, r: 'release'}
- {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'}
- {os: ubuntu-latest, r: 'release'}
# Use a CRAN-like environment to emulate CRAN submission checks
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
NOT_CRAN: false
R_KEEP_PKG_SOURCE: yes
steps:
- uses: actions/checkout@v2
- uses: n1hility/cancel-previous-runs@v2
with:
token: ${{ secrets.GITHUB_TOKEN }}
- uses: r-lib/actions/setup-pandoc@v2
- uses: r-lib/actions/setup-r@v2.2.6
with:
r-version: ${{ matrix.config.r }}
rtools-version: ${{ matrix.config.rtools }}
http-user-agent: ${{ matrix.config.http-user-agent }}
use-public-rspm: true
# Install some suggests packages
- uses: r-lib/actions/setup-r-dependencies@v2
with:
dependencies: NA
extra-packages: |
BH
RcppEigen
knitr
extraDistr
lubridate
wrswoR
tweedie
splines2
scoringRules
matrixStats
xts
collapse
rmarkdown
ggplot2
rjags
coda
testthat
usethis
rcmdcheck
- uses: r-lib/actions/check-r-package@v2
with:
build_args: 'c("--no-manual", "--no-build-vignettes")'
args: 'c("--no-examples", "--no-manual", "--as-cran", "--ignore-vignettes")'