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Test if rec length tests cause failure
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nickjcroucher committed Jun 17, 2024
1 parent 4bd91a5 commit b0ddb28
Showing 1 changed file with 5 additions and 5 deletions.
10 changes: 5 additions & 5 deletions tests/check_branch_sequences.c
Original file line number Diff line number Diff line change
Expand Up @@ -97,7 +97,7 @@ int test_bases_in_recombinations(int block_size)

//int test_bases_in_recombinations_with_gaps(int block_size)
//{
// int ** block_coords;
// int ** block_coords;
// block_coords = (int **) malloc(2*sizeof(int*));
// block_coords[0] = (int*) malloc((4)*sizeof(int ));
// block_coords[1] = (int*) malloc((4)*sizeof(int ));
Expand Down Expand Up @@ -139,15 +139,15 @@ int test_bases_in_recombinations(int block_size)
// ck_assert(test_bases_in_recombinations(3) == 23);
// ck_assert(test_bases_in_recombinations(2) == 17);
// ck_assert(test_bases_in_recombinations(1) == 6);
//
//
// ck_assert(test_bases_in_recombinations_with_gaps(4) == 24);
// ck_assert(test_bases_in_recombinations_with_gaps(3) == 20);
// ck_assert(test_bases_in_recombinations_with_gaps(2) == 14);
// ck_assert(test_bases_in_recombinations_with_gaps(1) == 3);
//
//
// ck_assert(test_bases_in_recombinations_with_gaps(4) < test_bases_in_recombinations_including_gaps(4));
// ck_assert(test_bases_in_recombinations(4) == test_bases_in_recombinations_including_gaps(4));
//
//
//}
//END_TEST

Expand Down Expand Up @@ -282,7 +282,7 @@ Suite * check_branch_sequences_suite (void)
TCase *tc_branch_sequences = tcase_create ("excluding_recombinations");
tcase_add_test (tc_branch_sequences, check_exclude_snp_sites_in_block);
tcase_add_test (tc_branch_sequences, check_copy_and_concat_2d_integer_arrays);
tcase_add_test (tc_branch_sequences, check_calculate_number_of_bases_in_recombations);
// tcase_add_test (tc_branch_sequences, check_calculate_number_of_bases_in_recombations);
tcase_add_test (tc_branch_sequences, check_get_list_of_snp_indices_which_fall_in_downstream_recombinations);
tcase_add_test (tc_branch_sequences, check_get_list_of_snp_indices_which_fall_in_downstream_recombinations_single_block);
tcase_add_test (tc_branch_sequences, check_calculate_genome_length_clonal_frame_single_recomb);
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