Further cleanup of session pages

nipraxis · Jan 1, 2024 · 2462e64 · 2462e64
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diff --git a/week1_session1.md b/week1_session1.md
@@ -1,14 +1,10 @@
+# Introduction and tools
+
 The first session is the Monday session. The second session is the Thursday
 session.
 
 These are the notes for the Monday session.
 
-We will update them before and after the session, to please keep checking back
-for updates.  Just refresh the page in your browser to get updates.
-
-The Zoom link for all sessions is
-<https://numfocus-org.zoom.us/j/89458437731?pwd=eTF0V252bHlKOXBucnBUWlVBSm9uUT09>.
-
 ## Recording
 
 [Recording of Monday Week 1 session
@@ -24,9 +20,10 @@ The Zoom link for all sessions is
   computer](https://textbook.nipraxis.org/surviving_computers.html).  See video link below.
 - Machinery:
     - <https://textbook.nipraxis.org>
-    - <https://learn.nipraxis.org>
+    - `https://learn.nipraxis.org` (`learn.nipraxis.org` is now down after our
+      CZI grant funding expired).
     - `https://hub.nipraxis.org` and the Jupyter notebook (`hub.nipraxis.org`
-      is now down after the end of our CZI grant funding).
+      is now down — see above).
     - <https://github.com/nipraxis>
 - About the project.
 - We will gradually move away from notebooks.
@@ -109,7 +106,3 @@ Specifically, see:
 
 Make sure you can do the [arrays
 exercise](https://mybinder.org/v2/gh/nipraxis/summer-2023/main?urlpath=tree/arrays/arrays.ipynb)
-
-## The end
-
-That's it for this session.
diff --git a/week1_session2.md b/week1_session2.md
@@ -1,12 +1,9 @@
+# Files, Numpy, and notebook exercises
+
 The *second session* is the Thursday session.
 
 These are the notes for the second session, for week 1.
 
-We will update them before and after the session, to please keep checking back for updates.  Just refresh the page in your browser to get updates.
-
-The Zoom link for all sessions is
-<https://numfocus-org.zoom.us/j/89458437731?pwd=eTF0V252bHlKOXBucnBUWlVBSm9uUT09>.
-
 ## Recording
 
 [Week 1 session
@@ -29,10 +26,6 @@ The Zoom link for all sessions is
 
 ## For homework
 
-See the [Week 1 session 1 page](https://apps.learn.nipraxis.org/learning/course/course-v1:Nipraxis+NI1+2023_NI1/block-v1:Nipraxis+NI1+2023_NI1+type@sequential+block@a292732b08514bbaa13ca5f862182dcd/block-v1:Nipraxis+NI1+2023_NI1+type@vertical+block@73fc602fe7034cd1913edd805920cf7e)
+See the [Week 1 session 1 page](week1_session1.md)
 
 In general, look for the homework in the session 1 page for each week.
-
-## The end
-
-That's it for this session.
diff --git a/week2_session1.md b/week2_session1.md
@@ -1,3 +1,5 @@
+# Arrays, images and plotting
+
 ## Recording
 
 [Week 2 session
@@ -37,7 +39,3 @@ If you do read it carefully, you will be investing in your own future
 productivity — Git version control is a powerful way to work more efficiently,
 especially in collaboration, and you need to understand the way that Git
 **thinks**, in order to use Git with fluency and efficiency.
-
-## That's it.
-
-That's it for this session.
diff --git a/week2_session2.md b/week2_session2.md
@@ -1,3 +1,5 @@
+# Three dimensional arrays
+
 ## Recording
 
 [Week 2 session
@@ -18,8 +20,4 @@
 
 ## For homework
 
-See the page for session 1.
-
-## That's it.
-
-That's it for this session.
+See the [page for session 1](week2_session2.md)
diff --git a/week3_session1.md b/week3_session1.md
@@ -1,3 +1,5 @@
+# Command line, modules and functions; FMRI artifacts
+
 ## Recording
 
 [Week 3 session 1
@@ -96,7 +98,3 @@ Here we a list of videos on choosing text editors:
   you have the right editor, how long it takes to get going with Vim.
 
 Please take time for this task, and investigate your options.
-
-## That's it.
-
-That's it for this session.
diff --git a/week3_session2.md b/week3_session2.md
@@ -1,3 +1,5 @@
+# Modules, functions, Git, Github
+
 ## Recording
 
 [Week 3 session 2 recording](https://numfocus-org.zoom.us/rec/share/YIQUaJjjBQg2HCLm1VbXJ4hPE2T3EeGuMjSMYBw--VajunFmm_PWXKuZwAEiUuVj.8GMzoJ6lXQZHsrMj)
@@ -14,7 +16,3 @@ More on the laptop way.
 * [on_modules](https://textbook.nipraxis.org/on_modules).
 
 We will come to the practice later (week 4).
-
-## That's it.
-
-That's it for this session.
diff --git a/week4_session1.md b/week4_session1.md
@@ -1,3 +1,5 @@
+# Indexing and four dimensions
+
 ## Recording
 
 [Week 4 session 1 recording](https://numfocus-org.zoom.us/rec/share/9K9OpxVP_9bu4AWA5JUpz1QspJB4QSjlAdQnEdlssIP5SZzf4lPj5txao_073QGs.nM-1yQNsqJDcC-aB)
@@ -96,7 +98,3 @@ tutorial](https://www.markdowntutorial.com).
 
 * [Voxel time course
   exercise](https://mybinder.org/v2/gh/nipraxis/summer-2023/main?urlpath=tree/first_activation_exercise/first_activation.ipynb)
-
-## That's it.
-
-That's it for this session.
diff --git a/week4_session2.md b/week4_session2.md
@@ -1,3 +1,5 @@
+# Github workflow; more on modules
+
 ## Recording
 
 [Week 4 session 2 recording](https://numfocus-org.zoom.us/rec/share/konU2x4UxxWKaIp5vSsf35xFPoEn0Pay8qhFSd-VbDMyE-z-jlVVrpv6oZhDzKw.uUltJwqOxFKlhFnP)
@@ -52,7 +54,3 @@ competition](https://www.youtube.com/watch?v=DdmyUZCl75s), and speculates this
 is because the best programmers think hard and for a long time about the right
 solution.  We recommend this course to you, of taking time to reflect on the
 right way to solve each problem.
-
-## That's it.
-
-That's it for this session.
diff --git a/week5_session1.md b/week5_session1.md
@@ -1,3 +1,5 @@
+# Github walkthrough; modules and testing
+
 ## Recording
 
 [Week5 session
@@ -135,7 +137,3 @@ Next work on the code to run the given commands and fix the errors.  See
 the instructions in the PR.
 
 Now push, and make a pull request.   Work together to find the best solution, review the pull request, and merge it.
-
-## That's it.
-
-That's it for this session.
diff --git a/week5_session2.md b/week5_session2.md
@@ -1,3 +1,5 @@
+# The project; modules and testing
+
 ## Recording
 
 [Week 5 session
@@ -46,7 +48,3 @@ output as you from the outlier detection script.
 * [validating data](https://textbook.nipraxis.org/validating_data)
 * [Module directories](https://textbook.nipraxis.org/module_directories.html)
 * [On testing](https://textbook.nipraxis.org/on_testing)
-
-## That's it.
-
-That's it for this session.
diff --git a/week6_session1.md b/week6_session1.md
@@ -1,3 +1,5 @@
+# DVARs, testing, voxel statistics
+
 ## Recording
 
 [Week 6 session
@@ -133,7 +135,3 @@ exercise, in case you want to use it.
     We will review your analysis plan, discuss and then Approve it using the
     Github interface.
 * Start work on the project.
-
-## That's it.
-
-That's it for this session.
diff --git a/week6_session2.md b/week6_session2.md
@@ -1,3 +1,5 @@
+# Voxel statistics and the HRF
+
 ## Recording
 
 [Week 6 session 2 recording](https://numfocus-org.zoom.us/rec/share/fDPg3YqA4dOdw-KavO4GfifC1H1XBknpfpZlB6f3lPvnR3HGqXXOzGXnmO6UYTHA.AKnm8n87aCnvMxr8)
@@ -15,7 +17,3 @@ A reminder about the project.
   function](https://textbook.nipraxis.org/convolution_background)
 * [HRF
   exercise](https://mybinder.org/v2/gh/nipraxis/summer-2023/main?urlpath=tree/make_hrf/make_hrf.ipynb)
-
-## That's it.
-
-That's it for this session.
diff --git a/week7_session1.md b/week7_session1.md
@@ -1,3 +1,5 @@
+# Testing, regression
+
 ## Recording
 
 [Week 7 session
@@ -29,7 +31,3 @@ Make sure you have done the [basic regression
 exercise](https://mybinder.org/v2/gh/nipraxis/summer-2023/main?urlpath=tree/regression_estimation/regression_estimation.ipynb)
 and the [on estimation
 exercise](https://mybinder.org/v2/gh/nipraxis/summer-2023/main?urlpath=tree/on_estimation/on_estimation.ipynb)
-
-## That's it.
-
-That's it for this session.
diff --git a/week7_session2.md b/week7_session2.md
@@ -1,3 +1,5 @@
+# Statistics, continued
+
 ## Recording
 
 [Week 7 session
@@ -12,7 +14,3 @@
 * [The General Linear Model](https://textbook.nipraxis.org/glm_intro)
 * [On estimation
   exercise](https://mybinder.org/v2/gh/nipraxis/summer-2023/main?urlpath=tree/on_estimation/on_estimation.ipynb)
-
-## That's it.
-
-That's it for this session.
diff --git a/week8_session1.md b/week8_session1.md
@@ -1,3 +1,5 @@
+# The General Linear Model, multiple voxels
+
 ## Recording
 
 [Week 8 session
@@ -31,7 +33,3 @@ See also (for reference):
 ## Homework
 
 Work on your projects.
-
-## That's it.
-
-That's it for this session.
diff --git a/week8_session2.md b/week8_session2.md
@@ -1,3 +1,5 @@
+# Whole image statistics; introduction to spatial processing
+
 ## Recording
 
 [Week 8 session
@@ -45,7 +47,3 @@ Also see: a [worked example of general linear
 * [Images and affines](https://textbook.nipraxis.org/images_and_affines)
 * [On gradient descent
   optimization](https://lisds.github.io/textbook/mean-slopes/optimization)
-
-## That's it.
-
-That's it for this session, and for the course.  Thanks for joining.