General purpose environment that lets you work with common bioinformatics file types:
mamba create -n ngsutils\
samtools\
picard-slim\
sra-tools\
pysam\
seqtk\
bedtools\
bowtie2\
bwa\
hisat2\
star\
stringtie\
gffcompare\
gffread\
htseq\
subread\
biopython\
numpy\
scipy\
minimap2
Python environment with scanpy, scvelo, cellrank and other single-cell packages
mamba create -n scvelo\
scanpy\
anndata\
scipy\
numpy\
pandas\
matplotlib\
basemap\
scikit-learn\
umap-learn\
seaborn\
cellrank