3.0 Release Candidate 3
Pre-release
Pre-release
v3.0.0-rc.3
benknoll-umn
Ben Knoll
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benknoll-umn
Ben Knoll
Various bug fixes (Mainly RTF). Made it easier to programmatically create pipelines and use custom input sources. Better logging messages around configuration.
Breaking change:
The biomedicus run command argument for the output directory has switched to an option -o. The correct syntax is now
biomedicus run /path_to/input_dir/ -o /path_to/output_dir/ This is because the option is only used in the case of a serializer (default: json) and if the serializer is set to none the option will not be used.