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1. nf-core/genomeassembler nf-core/genomeassembler Public

   Assembly and scaffolding of haploid / unphased genomes from long ONT or PacBio HiFi reads

   Nextflow 29 19

2. nf-plotsv nf-plotsv Public

   Compare genomes using minimap2, SyRi and plotsr in a nextflow pipeline

   Nextflow 4 1

3. nf-annotate nf-annotate Public

   (Plant) genome annotation pipeline

   Nextflow 2 1

4. syri_gggenomes syri_gggenomes Public

   Plot SyRi output via gggenomes

   R 3

5. Gregor-Mendel-Institute/gwaR Gregor-Mendel-Institute/gwaR Public

   A collection of R functions to conduct downstream GWAS analysis for arabidopsis thaliana.

   R 5 1