Merge pull request #46 from obophenotype/ODK-Release-January-16-2024

Odk release january 16 2024
obophenotype · Jan 17, 2024 · fb7600c · fb7600c
2 parents 99f006c + 057cedb
commit fb7600c
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Showing 14 changed files with 33 additions and 33 deletions.
diff --git a/src/ontology/Makefile b/src/ontology/Makefile
@@ -1,7 +1,7 @@
 # ----------------------------------------
 # Makefile for wbls
 # Generated using ontology-development-kit
-# ODK Version: v1.4.2
+# ODK Version: v1.4.3
 # ----------------------------------------
 # IMPORTANT: DO NOT EDIT THIS FILE. To override default make goals, use wbls.Makefile instead
 
@@ -43,7 +43,7 @@ REPORT_PROFILE_OPTS =
 OBO_FORMAT_OPTIONS =        
 SPARQL_VALIDATION_CHECKS =  owldef-self-reference iri-range label-with-iri multiple-replaced_by 
 SPARQL_EXPORTS =            basic-report class-count-by-prefix edges xrefs obsoletes synonyms 
-ODK_VERSION_MAKEFILE =      v1.4.2
+ODK_VERSION_MAKEFILE =      v1.4.3
 
 TODAY ?=                    $(shell date +%Y-%m-%d)
 OBODATE ?=                  $(shell date +'%d:%m:%Y %H:%M')

diff --git a/src/ontology/imports/ro_import.owl b/src/ontology/imports/ro_import.owl
@@ -7,9 +7,9 @@ Prefix(rdfs:=<http://www.w3.org/2000/01/rdf-schema#>)
 
 
 Ontology(<http://purl.obolibrary.org/obo/wbls/imports/ro_import.owl>
-<http://purl.obolibrary.org/obo/wbls/releases/2023-09-26/imports/ro_import.owl>
+<http://purl.obolibrary.org/obo/wbls/releases/2024-01-16/imports/ro_import.owl>
 Annotation(<http://purl.org/dc/elements/1.1/source> <http://purl.obolibrary.org/obo/ro/releases/2023-08-18/ro.owl>)
-Annotation(owl:versionInfo "2023-09-26")
+Annotation(owl:versionInfo "2024-01-16")
 
 Declaration(Class(<http://purl.obolibrary.org/obo/BFO_0000002>))
 Declaration(Class(<http://purl.obolibrary.org/obo/BFO_0000003>))

diff --git a/wbls-base.json b/wbls-base.json
@@ -40,9 +40,9 @@
         "val" : "Version: 1.04"
       }, {
         "pred" : "http://www.w3.org/2002/07/owl#versionInfo",
-        "val" : "2023-09-26"
+        "val" : "2024-01-16"
       } ],
-      "version" : "http://purl.obolibrary.org/obo/wbls/releases/2023-09-26/wbls-base.json"
+      "version" : "http://purl.obolibrary.org/obo/wbls/releases/2024-01-16/wbls-base.json"
     },
     "nodes" : [ {
       "id" : "http://purl.obolibrary.org/obo/BFO_0000050",

diff --git a/wbls-base.obo b/wbls-base.obo
@@ -1,5 +1,5 @@
 format-version: 1.2
-data-version: wbls/releases/2023-09-26/wbls-base.owl
+data-version: wbls/releases/2024-01-16/wbls-base.owl
 date: 15:11:2017 12:24
 saved-by: chris-grove
 auto-generated-by: OBO-Edit 2.2-rc1
@@ -12,7 +12,7 @@ property_value: http://purl.org/dc/elements/1.1/title "C. elegans Development On
 property_value: http://purl.org/dc/elements/1.1/type IAO:8000001
 property_value: http://purl.org/dc/terms/license "http://creativecommons.org/licenses/by/4.0/" xsd:string
 property_value: IAO:0000700 WBls:0000075
-property_value: owl:versionInfo "2023-09-26" xsd:string
+property_value: owl:versionInfo "2024-01-16" xsd:string
 
 [Term]
 id: WBls:0000001

diff --git a/wbls-base.owl b/wbls-base.owl
@@ -12,7 +12,7 @@
      xmlns:dcterms="http://purl.org/dc/terms/"
      xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#">
     <owl:Ontology rdf:about="http://purl.obolibrary.org/obo/wbls/wbls-base.owl">
-        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/wbls/releases/2023-09-26/wbls-base.owl"/>
+        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/wbls/releases/2024-01-16/wbls-base.owl"/>
         <obo:IAO_0000700 rdf:resource="http://purl.obolibrary.org/obo/WBls_0000075"/>
         <dce:description>Ontology about the development and life stages of the C. elegans</dce:description>
         <dce:title>C. elegans Development Ontology</dce:title>
@@ -25,7 +25,7 @@
         <oboInOwl:saved-by>chris-grove</oboInOwl:saved-by>
         <rdfs:comment>Editors: Wen J. Chen &amp; Daniela Raciti, Raymond Lee, Chris Grove, WormBase, Caltech. Jane Lomax, Wellcome Trust Sanger Institute.</rdfs:comment>
         <rdfs:comment>Version: 1.04</rdfs:comment>
-        <owl:versionInfo>2023-09-26</owl:versionInfo>
+        <owl:versionInfo>2024-01-16</owl:versionInfo>
     </owl:Ontology>
 
 
@@ -25467,5 +25467,5 @@
 
 
 
-<!-- Generated by the OWL API (version 4.5.25) https://github.com/owlcs/owlapi -->
+<!-- Generated by the OWL API (version 4.5.26) https://github.com/owlcs/owlapi -->
 
diff --git a/wbls-full.json b/wbls-full.json
@@ -37,9 +37,9 @@
         "val" : "Version: 1.04"
       }, {
         "pred" : "http://www.w3.org/2002/07/owl#versionInfo",
-        "val" : "2023-09-26"
+        "val" : "2024-01-16"
       } ],
-      "version" : "http://purl.obolibrary.org/obo/wbls/releases/2023-09-26/wbls-full.json"
+      "version" : "http://purl.obolibrary.org/obo/wbls/releases/2024-01-16/wbls-full.json"
     },
     "nodes" : [ {
       "id" : "http://purl.obolibrary.org/obo/IAO_0000125",

diff --git a/wbls-full.obo b/wbls-full.obo
@@ -1,5 +1,5 @@
 format-version: 1.2
-data-version: wbls/releases/2023-09-26/wbls-full.owl
+data-version: wbls/releases/2024-01-16/wbls-full.owl
 date: 15:11:2017 12:24
 saved-by: chris-grove
 auto-generated-by: OBO-Edit 2.2-rc1
@@ -19,7 +19,7 @@ property_value: http://purl.org/dc/elements/1.1/description "Ontology about the
 property_value: http://purl.org/dc/elements/1.1/title "C. elegans Development Ontology" xsd:string
 property_value: http://purl.org/dc/terms/license "http://creativecommons.org/licenses/by/4.0/" xsd:string
 property_value: IAO:0000700 WBls:0000075
-property_value: owl:versionInfo "2023-09-26" xsd:string
+property_value: owl:versionInfo "2024-01-16" xsd:string
 
 [Term]
 id: BFO:0000002
@@ -9874,7 +9874,7 @@ subset: http://purl.obolibrary.org/obo/valid_for_gocam
 subset: ro-eco
 property_value: IAO:0000114 IAO:0000125
 property_value: RO:0001900 RO:0001901
-holds_over_chain: BFO:0000051 part_of {http://purl.obolibrary.org/obo/RO_0002582="true"}
+holds_over_chain: BFO:0000051 part_of {RO:0002582="true"}
 holds_over_chain: BFO:0000051 RO:0002131
 holds_over_chain: part_of part_of
 is_symmetric: true
@@ -10002,7 +10002,7 @@ def: "c stands in this relationship to p if and only if there exists some p' suc
 property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165
 property_value: IAO:0000118 "has function in" xsd:string
 property_value: seeAlso http://purl.obolibrary.org/obo/ro/docs/reflexivity/
-holds_over_chain: RO:0002215 part_of {http://purl.obolibrary.org/obo/RO_0002582="true"}
+holds_over_chain: RO:0002215 part_of {RO:0002582="true"}
 is_a: RO:0002328 ! functionally related to
 is_a: RO:0002500 ! causal agent in process
 
@@ -10137,7 +10137,7 @@ property_value: IAO:0000118 "inheres in part of" xsd:string
 property_value: IAO:0000119 http://www.ncbi.nlm.nih.gov/pubmed/20064205
 property_value: RO:0001900 RO:0001901
 property_value: seeAlso http://purl.obolibrary.org/obo/ro/docs/reflexivity/
-holds_over_chain: RO:0000052 part_of {http://purl.obolibrary.org/obo/RO_0002582="true"}
+holds_over_chain: RO:0000052 part_of {RO:0002582="true"}
 is_a: RO:0002502 ! depends on
 transitive_over: part_of ! part_of
 
@@ -10188,7 +10188,7 @@ name: part of structure that is capable of
 def: "this relation holds between c and p when c is part of some c', and c' is capable of p." []
 property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165
 property_value: IAO:0000118 "false" xsd:boolean
-holds_over_chain: part_of RO:0002215 {http://purl.obolibrary.org/obo/RO_0002581="true"}
+holds_over_chain: part_of RO:0002215 {RO:0002581="true"}
 is_a: RO:0002328 ! functionally related to
 
 [Typedef]

diff --git a/wbls-full.owl b/wbls-full.owl
@@ -19,7 +19,7 @@
      xmlns:subsets="http://purl.obolibrary.org/obo/ro/subsets#"
      xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#">
     <owl:Ontology rdf:about="http://purl.obolibrary.org/obo/wbls/wbls-full.owl">
-        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/wbls/releases/2023-09-26/wbls-full.owl"/>
+        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/wbls/releases/2024-01-16/wbls-full.owl"/>
         <obo:IAO_0000700 rdf:resource="http://purl.obolibrary.org/obo/WBls_0000075"/>
         <dce:description>Ontology about the development and life stages of the C. elegans</dce:description>
         <dce:title>C. elegans Development Ontology</dce:title>
@@ -31,7 +31,7 @@
         <oboInOwl:saved-by>chris-grove</oboInOwl:saved-by>
         <rdfs:comment>Editors: Wen J. Chen &amp; Daniela Raciti, Raymond Lee, Chris Grove, WormBase, Caltech. Jane Lomax, Wellcome Trust Sanger Institute.</rdfs:comment>
         <rdfs:comment>Version: 1.04</rdfs:comment>
-        <owl:versionInfo>2023-09-26</owl:versionInfo>
+        <owl:versionInfo>2024-01-16</owl:versionInfo>
     </owl:Ontology>
 
 
@@ -30904,5 +30904,5 @@ e.g.  if GP X enables ATPase coupled transporter activity&apos; and &apos;ATPase
 
 
 
-<!-- Generated by the OWL API (version 4.5.25) https://github.com/owlcs/owlapi -->
+<!-- Generated by the OWL API (version 4.5.26) https://github.com/owlcs/owlapi -->
 
diff --git a/wbls-simple.json b/wbls-simple.json
@@ -37,9 +37,9 @@
         "val" : "Version: 1.04"
       }, {
         "pred" : "http://www.w3.org/2002/07/owl#versionInfo",
-        "val" : "2023-09-26"
+        "val" : "2024-01-16"
       } ],
-      "version" : "http://purl.obolibrary.org/obo/wbls/releases/2023-09-26/wbls-simple.json"
+      "version" : "http://purl.obolibrary.org/obo/wbls/releases/2024-01-16/wbls-simple.json"
     },
     "nodes" : [ {
       "id" : "http://purl.obolibrary.org/obo/BFO_0000050",

diff --git a/wbls-simple.obo b/wbls-simple.obo
@@ -1,5 +1,5 @@
 format-version: 1.2
-data-version: wbls/releases/2023-09-26/wbls-simple.owl
+data-version: wbls/releases/2024-01-16/wbls-simple.owl
 date: 15:11:2017 12:24
 saved-by: chris-grove
 auto-generated-by: OBO-Edit 2.2-rc1

diff --git a/wbls-simple.owl b/wbls-simple.owl
@@ -11,7 +11,7 @@
      xmlns:terms="http://purl.org/dc/terms/"
      xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#">
     <owl:Ontology rdf:about="http://purl.obolibrary.org/obo/wbls/wbls-simple.owl">
-        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/wbls/releases/2023-09-26/wbls-simple.owl"/>
+        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/wbls/releases/2024-01-16/wbls-simple.owl"/>
         <obo:IAO_0000700 rdf:resource="http://purl.obolibrary.org/obo/WBls_0000075"/>
         <dc:description>Ontology about the development and life stages of the C. elegans</dc:description>
         <dc:title>C. elegans Development Ontology</dc:title>
@@ -25853,5 +25853,5 @@ A continuant cannot be part of an occurrent: use &apos;participates in&apos;. An
 
 
 
-<!-- Generated by the OWL API (version 4.5.25) https://github.com/owlcs/owlapi -->
+<!-- Generated by the OWL API (version 4.5.26) https://github.com/owlcs/owlapi -->
 
diff --git a/wbls.json b/wbls.json
@@ -37,9 +37,9 @@
         "val" : "Version: 1.04"
       }, {
         "pred" : "http://www.w3.org/2002/07/owl#versionInfo",
-        "val" : "2023-09-26"
+        "val" : "2024-01-16"
       } ],
-      "version" : "http://purl.obolibrary.org/obo/wbls/releases/2023-09-26/wbls.json"
+      "version" : "http://purl.obolibrary.org/obo/wbls/releases/2024-01-16/wbls.json"
     },
     "nodes" : [ {
       "id" : "http://purl.obolibrary.org/obo/IAO_0000125",

diff --git a/wbls.obo b/wbls.obo
@@ -1,5 +1,5 @@
 format-version: 1.2
-data-version: wbls/releases/2023-09-26/wbls-simple.owl
+data-version: wbls/releases/2024-01-16/wbls-simple.owl
 date: 15:11:2017 12:24
 saved-by: chris-grove
 auto-generated-by: OBO-Edit 2.2-rc1

diff --git a/wbls.owl b/wbls.owl
@@ -19,7 +19,7 @@
      xmlns:subsets="http://purl.obolibrary.org/obo/ro/subsets#"
      xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#">
     <owl:Ontology rdf:about="http://purl.obolibrary.org/obo/wbls.owl">
-        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/wbls/releases/2023-09-26/wbls.owl"/>
+        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/wbls/releases/2024-01-16/wbls.owl"/>
         <obo:IAO_0000700 rdf:resource="http://purl.obolibrary.org/obo/WBls_0000075"/>
         <dce:description>Ontology about the development and life stages of the C. elegans</dce:description>
         <dce:title>C. elegans Development Ontology</dce:title>
@@ -31,7 +31,7 @@
         <oboInOwl:saved-by>chris-grove</oboInOwl:saved-by>
         <rdfs:comment>Editors: Wen J. Chen &amp; Daniela Raciti, Raymond Lee, Chris Grove, WormBase, Caltech. Jane Lomax, Wellcome Trust Sanger Institute.</rdfs:comment>
         <rdfs:comment>Version: 1.04</rdfs:comment>
-        <owl:versionInfo>2023-09-26</owl:versionInfo>
+        <owl:versionInfo>2024-01-16</owl:versionInfo>
     </owl:Ontology>
 
 
@@ -30904,5 +30904,5 @@ e.g.  if GP X enables ATPase coupled transporter activity&apos; and &apos;ATPase
 
 
 
-<!-- Generated by the OWL API (version 4.5.25) https://github.com/owlcs/owlapi -->
+<!-- Generated by the OWL API (version 4.5.26) https://github.com/owlcs/owlapi -->