Import fix #67
Workflow file for this run
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| name: quick test | |
| on: | |
| push: | |
| branches-ignore: | |
| - main | |
| paths: | |
| - '**.py' | |
| - '.github/workflows/quick_test.yml' | |
| - 'pyproject.toml' | |
| jobs: | |
| lint: | |
| name: lint | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: clone repository | |
| uses: actions/checkout@v3 | |
| - name: install Python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: '3.11' | |
| - name: load cached Python installation | |
| id: cache | |
| uses: actions/cache@v3 | |
| with: | |
| path: ${{ env.pythonLocation }} | |
| key: lint-${{ runner.os }}-${{ env.pythonLocation }}-${{ hashFiles('pyproject.toml') }} | |
| - name: install linters | |
| run: pip install flake8 oitnb | |
| - name: lint with flake8 | |
| run: | | |
| # stop the build if there are Python syntax errors or undefined names | |
| flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
| # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
| flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
| - name: lint with oitnb | |
| run: oitnb . --check | |
| test: | |
| needs: lint | |
| name: quick test | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: clone repository | |
| uses: actions/checkout@v3 | |
| - name: install Python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: '3.11' | |
| - name: load cached Python installation | |
| id: cache | |
| uses: actions/cache@v3 | |
| with: | |
| path: ${{ env.pythonLocation }} | |
| key: test-${{ runner.os }}-${{ env.pythonLocation }}-${{ hashFiles('pyproject.toml') }} | |
| - name: install dependencies | |
| run: | | |
| sudo apt update | |
| sudo apt install libhdf5-dev | |
| sudo apt install libnetcdf-dev | |
| pip install ".[testing]" | |
| python -m pip install --upgrade --force-reinstall --no-deps --no-cache-dir netcdf4 --no-binary netcdf4 | |
| - name: run tests | |
| run: pytest --numprocesses auto |