Genome Sequence Informatics
Repositories for OICR's Genome Sequence Informatics team
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- Toronto, ON
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- crosscheckFingerprints Public
oicr-gsi/crosscheckFingerprints’s past year of commit activity - t1k Public
oicr-gsi/t1k’s past year of commit activity - starFusion Public
Workflow that takes a fastq pair or optionally a chimeric file from STAR and detects RNA-seq fusion events.
oicr-gsi/starFusion’s past year of commit activity - neoantigenPrediction Public
oicr-gsi/neoantigenPrediction’s past year of commit activity - ncov2019ArticNfNanopore Public
This Nextflow pipeline automates the ARTIC network nCoV-2019 novel coronavirus bioinformatics protocol.
oicr-gsi/ncov2019ArticNfNanopore’s past year of commit activity - nanoporeFilterFastq Public
Workflow for filter nanopore fastq file, wdl wrapper for snakemake workflow forked from Simpson Lab repo.
oicr-gsi/nanoporeFilterFastq’s past year of commit activity - nanoporeSVAll Public
Workflow for executing all task of nanopore filterfastq, nanopore mapping, nanopore coverage analysis, nanopore structural variants analysis, wdl wrapper for snakemake workflow forked from Simpson Lab repo.
oicr-gsi/nanoporeSVAll’s past year of commit activity
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