Test

Merge pull request #10 from openproblems-bio/segm_m_binning #139

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Triggered via push December 3, 2024 18:47

LouisK92

main

Status Failure

Total duration 6m 14s

Artifacts –

test.yaml

on: push

build / List components to test

Matrix: build / Test

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1 error and 18 warnings

build / Test (cellpose, methods_segmentation, src/methods_segmentation/cellpose/config.vsh.yaml, src/meth...

Process completed with exit code 1.

build / List components to test

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build / Test (fetch_task_execution, core, src/core/fetch_task_execution/config.vsh.yaml, src/core/fetch_t...

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build / Test (vizgen_merscope, datasets/loaders, src/datasets/loaders/vizgen_merscope/config.vsh.yaml, sr...

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build / Test (basic_transcript_assignment, methods_transcript_assignment, src/methods_transcript_assignme...

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build / Test (custom_segmentation, methods_segmentation, src/methods_segmentation/custom_segmentation/con...

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build / Test (tenx_xenium, datasets/loaders, src/datasets/loaders/tenx_xenium/config.vsh.yaml, src/datase...

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build / Test (crop_region, datasets/processors, src/datasets/processors/crop_region/config.vsh.yaml, src/...

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build / Test (process_dataset, data_processors, src/data_processors/process_dataset/config.vsh.yaml, src/...

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build / Test (allen_brain_cell_atlas, datasets/loaders, src/datasets/loaders/allen_brain_cell_atlas/confi...

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build / Test (basic_qc_filter, methods_qc_filter, src/methods_qc_filter/basic_qc_filter/config.vsh.yaml, ...

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build / Test (basic_count_aggregation, methods_count_aggregation, src/methods_count_aggregation/basic_cou...

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build / Test (binning, methods_segmentation, src/methods_segmentation/binning/config.vsh.yaml, src/method...

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build / Test (alpha_shapes, methods_calculate_cell_volume, src/methods_calculate_cell_volume/alpha_shapes...

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build / Test (ssam, methods_cell_type_annotation, src/methods_cell_type_annotation/ssam/config.vsh.yaml, ...

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build / Test (similarity, metrics, src/metrics/similarity/config.vsh.yaml, src/metrics/similarity/, pytho...

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build / Test (gene_efficiency_correction, methods_expression_correction, src/methods_expression_correctio...

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build / Test (cellpose, methods_segmentation, src/methods_segmentation/cellpose/config.vsh.yaml, src/meth...

ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636

build / Test (normalize_by_volume, methods_normalization, src/methods_normalization/normalize_by_volume/c...

ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636