Merge pull request #13 from opensafely/weekly-update-mar-29

updated outputs
opensafely · Mar 29, 2021 · 8eea927 · 8eea927
2 parents e6acb0c + 0e05f73
commit 8eea927
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diff --git a/notebooks/opensafely_vaccine_report_overall.ipynb b/notebooks/opensafely_vaccine_report_overall.ipynb
@@ -26,7 +26,7 @@
     {
      "data": {
       "text/markdown": [
-       "### Report last updated **23 Mar 2021**"
+       "### Report last updated **29 Mar 2021**"
       ],
       "text/plain": [
        "<IPython.core.display.Markdown object>"
@@ -19483,6 +19483,15 @@
     "    show_chart(item)    "
    ]
   },
+  {
+   "cell_type": "markdown",
+   "metadata": {},
+   "source": [
+    "## \n",
+    "## Trends in vaccination rates of 60-64 population according to demographic/clinical features, cumulatively by day. <a name='charts60' />\n",
+    "**\\*National rate calculated as at latest date for vaccinations recorded across all TPP practices.**"
+   ]
+  },
   {
    "cell_type": "code",
    "execution_count": 8,
@@ -29426,7 +29435,7 @@
        "- Ethnicity information is primarily retrieved from GP records.                  \n",
        "- Where missing in GP records, as of March 8 2021, it is then retrieved from hospital records if present.                  \n",
        " - For patients with multiple different ethnicities recorded, we use the most common non-missing ethnicity                  \n",
-       " recorded over the last ~5 years (or latest if tied) with priority to inpatient records, then outpatient and then A&E.                 \n",
+       " recorded in inpatients, outpatients or A&E over the last ~5 years (or latest if tied).                 \n",
        "- Patient counts are rounded to the nearest 7"
       ],
       "text/plain": [
@@ -29530,7 +29539,7 @@
     "display(Markdown(\"- Ethnicity information is primarily retrieved from GP records. \\\n",
     "                 \\n- Where missing in GP records, as of March 8 2021, it is then retrieved from hospital records if present. \\\n",
     "                 \\n - For patients with multiple different ethnicities recorded, we use the most common non-missing ethnicity \\\n",
-    "                 \\n recorded over the last ~5 years (or latest if tied) with priority to inpatient records, then outpatient and then A&E.\\\n",
+    "                 \\n recorded in inpatients, outpatients or A&E over the last ~5 years (or latest if tied).\\\n",
     "                 \\n- Patient counts are rounded to the nearest 7\"))\n",
     "\n",
     "tab[[\"total population (n)\",\"ethnicity coverage (%)\"]].drop(\"vaccinated under 60s, not in other eligible groups shown\")"

diff --git a/...able_outputs/figure_csvs/Cumulative vaccination figures among each eligible group_tpp.csv b/...able_outputs/figure_csvs/Cumulative vaccination figures among each eligible group_tpp.csv
diff --git a/..._csvs/Cumulative vaccination percent among 60-64 population by ethnicity 6 groups_tpp.csv b/..._csvs/Cumulative vaccination percent among 60-64 population by ethnicity 6 groups_tpp.csv
diff --git a/...gure_csvs/Cumulative vaccination percent among 60-64 population by imd categories_tpp.csv b/...gure_csvs/Cumulative vaccination percent among 60-64 population by imd categories_tpp.csv
diff --git a/.../Cumulative vaccination percent among 60-64 population by psychosis schiz bipolar_tpp.csv b/.../Cumulative vaccination percent among 60-64 population by psychosis schiz bipolar_tpp.csv
@@ -1,103 +1,109 @@
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diff --git a/..._outputs/figure_csvs/Cumulative vaccination percent among 60-64 population by sex_tpp.csv b/..._outputs/figure_csvs/Cumulative vaccination percent among 60-64 population by sex_tpp.csv