Curation for Platform release 24.09

What's Changed

• chore(pgx): update pgx evidence/phenotypes lut for 24.09 by @ireneisdoomed in #35

Full Changelog: 24.09...24.09.1

Curation for Platform release 24.09

What's Changed

• feat: new curation manifest by @project-defiant in #31
• feat: add trait mappings for finngen r11 endpoints by @ireneisdoomed in #32
• fix: fix nan in disease curation file by @ireneisdoomed in #33

New Contributors

• @project-defiant made their first contribution in #31

Full Changelog: 24.06...24.09

Curation for Platform release 24.03

What's Changed

• feat: updating gwas curation for the 24.02 release by @DSuveges in #21
• feat: add az phewas v5 trait curation by @ireneisdoomed in #22
• feat(burden): add associations from PMID:38052806 by @ireneisdoomed in #24
• feat(burden): add associations from PMID:35396579 by @ireneisdoomed in #23
• Revert "feat: add az phewas v5 trait curation" by @ireneisdoomed in #25
• feat: add az phewas v5 trait curation by @ireneisdoomed in #26
• chore: update PGx traits for 24.06 by @ireneisdoomed in #27
• fix (burden): add statisticalMethodOverview to PMID:35396579 evidence by @ireneisdoomed in #28
• fix (burden): change targetFromSource to targetFromSourceId in PMID:35396579 evd by @ireneisdoomed in #29
• chore: invert shape PGx traits for 24.06 by @ireneisdoomed in #30

Full Changelog: 24.03...24.06

Curation for Platform release 24.03

What's Changed

• feat: adding GWAS Catalog study curation by @DSuveges in #17
• feat: updating curation for release 23.12.27 by @DSuveges in #18
• feat: add pgx gpt phenotypes by @ireneisdoomed in #19
• generalizing tissue name to uberon mapping by @DSuveges in #20

Full Changelog: 23.12...24.03

Curation for Platform release 23.12

What's Changed

• Replace GTEx V7 mappings with V8 by @tskir in #16

Full Changelog: 23.06...23.12

Curation for Platform release June 2023

What's Changed

• New mappings introduced by @DSuveges in #15

New Mappings:

• CRISPR screen to disease mapping for CRISPR Brain dataset.
• Tissue label to UBERON mapping for DepMap

Full Changelog: 23.02...23.06

Release for 23.02

What's Changed

• feat: nightingale curation by @ireneisdoomed in #14

Full Changelog: 22.11.2...23.02

Bugfixes to AMP-PD curation

A problem with the floating point notation in the resourceScore and pValueMantissa fields of AMP-PD curation has been fixed.

Full Changelog: 22.11.1...22.11.2

Curation for Platform release 22.11

What's Changed

• feat: added curation for PPR569774 by @ireneisdoomed in #12
• refactor: added AMP-PD project for PPR569774 by @ireneisdoomed in #13

Full Changelog: 22.09.1...22.11.1

Curation for Platform release 22.09

What's Changed

• Create LICENSE by @ktsirigos in #1
• Restructure repo to gather all mappings + target safety curation by @ireneisdoomed in #2
• Maintenance script for mapping list normalisation by @tskir in #3
• Gene burden curation by @ireneisdoomed in #5
• Merge multiple previous manual mapping sources and expand documentation by @tskir in #4
• REGENERON is part of the static gene burden curation by @ireneisdoomed in #7
• AZ Trait curation for the gene burden analyses by @ireneisdoomed in #6
• New Genebass curation and other improvements by @ireneisdoomed in #8
• [Fix] All ASC evidence has EFO_0003756 as mapped disease by @ireneisdoomed in #10
• Convert mappings back into URIs, normalise and update the script by @tskir in #9
• New burden curation, improved documentation and bug fixes by @ireneisdoomed in #11

New Contributors

• @ktsirigos made their first contribution in #1
• @ireneisdoomed made their first contribution in #2
• @tskir made their first contribution in #3

Full Changelog: https://github.com/opentargets/curation/commits/22.09.1