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Methods for estimating parameters in epidemiology models

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epi_inference

A python package that supports inference for epidemiology models

Installation with CONDA (for users)

  • conda install pyomo
  • conda install -c conda-forge ipopt
  • python setup.py install

Installation with CONDA (for developers)

  • conda install pyomo
  • conda install -c conda-forge ipopt
  • python setup.py develop

After installation, edits in the epi_inference software directory will immediately change the installed epi_inference python package.

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Methods for estimating parameters in epidemiology models

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