Repositories list

• plots.r

  Public
  Generate beautiful forest plots with ease

  R

  •

  Other

  •0•0•0•0•Updated Jan 6, 2025Jan 6, 2025

• phewmr-filter-snps

  Public
  Rust

  •

  MIT License

  •0•0•0•0•Updated Dec 22, 2024Dec 22, 2024

• lmutils

  Public
  Utilities for linear regression-based statistical computation, particularly in the same vein as methods like MonsterLM and RARity

  Rust

  •

  MIT License

  •0•0•0•0•Updated Dec 10, 2024Dec 10, 2024

• lmutils.r

  Public
  Utilities for linear regression-based statistical computation, particularly in the same vein as methods like MonsterLM and RARity

  Rust

  •0•0•0•0•Updated Nov 17, 2024Nov 17, 2024

• MonsterLM

  Public
  A method to estimate the proportion of variance explained by heritability and gene-by-environment interactions, in a fast, accurate, efficient, and unbiased manner on biobank-scale datasets (N>300,000).

  Shell

  •

  GNU General Public License v3.0

  •0•1•2•0•Updated Apr 3, 2024Apr 3, 2024

• RARity

  Public
  A method to estimate rare variant heritability. Its versatility lies in the ability to estimate both gene-level and exome-wide heritability, in a fast, accurate, and unbiased manner.

  R

  •

  GNU General Public License v3.0

  •0•2•0•0•Updated Dec 23, 2023Dec 23, 2023

• RV-EXCALIBER

  Public
  A methodological framework to conduct a calibrated gene-based rare variant association test by leveraging the genome aggregation database (gnomAD) as an external control dataset

  Shell

  •

  GNU General Public License v3.0

  •1•9•1•0•Updated Mar 4, 2023Mar 4, 2023

• AutoMitoC

  Public
  Automatic Mitochondrial DNA Copy Number (mtDNA-CN) Pipeline to infer mtDNA-CN from SNP array intensities

  R

  •

  GNU General Public License v3.0

  •3•4•1•0•Updated Feb 14, 2022Feb 14, 2022

• GraBLD

  Public
  an R based software package that makes polygenic traits prediction using gradient boosted and LD adjusted gene score weights.

  R

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  Other

  •4•10•0•0•Updated Apr 9, 2019Apr 9, 2019