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    13 repositories

    • OpenMicroscopy

      Public
      Non-comprehensive list of projects and resources related to open microscopy.
      Other
      •31•154•0•0•Updated Feb 18, 2026Feb 18, 2026

    • sptPALM-Python

      Public
      sptPALM port from Matlab
      Python
      •0•0•0•0•Updated Feb 2, 2026Feb 2, 2026

    • AnalyseDirectionality

      Public
      Java
      •
      GNU General Public License v3.0
      •0•3•0•0•Updated Jan 16, 2026Jan 16, 2026

    • Protein_distribution_analyzer

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Jul 14, 2025Jul 14, 2025

    • prj-thunderstorm

      Public
      ThunderSTORM: a comprehensive ImageJ plugin for SMLM data analysis and super-resolution imaging
      Java
      •
      GNU General Public License v3.0
      •45•1•0•0•Updated Feb 18, 2025Feb 18, 2025

    • HohlbeinLab.github.io

      Public
      Github Pages
      HTML
      •7•13•0•0•Updated Apr 29, 2024Apr 29, 2024

    • anaDDA

      Public
      anaDDA software for extracting transition rates from D distributions
      MATLAB
      •4•2•1•0•Updated Feb 19, 2023Feb 19, 2023

    • Thorlabs_DM_Device_Adapter

      Public
      Device adapter for Thorlabs DMP40 for Micro-Manager
      C++
      •0•0•0•0•Updated Aug 2, 2022Aug 2, 2022

    • sSMLMAnalyzer

      Public
      Java
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jul 4, 2022Jul 4, 2022

    • FTM2

      Public
      A rewritten version of the Fast Temporal Median Filter
      Java
      •
      GNU General Public License v3.0
      •1•8•1•0•Updated Jun 15, 2022Jun 15, 2022

    • SMALL-LABS-pSMLM

      Public
      Public repository of SMALL-LABS_Hohlbein
      MATLAB
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Sep 25, 2020Sep 25, 2020

    • thunderstorm

      Public
      ThunderSTORM: a comprehensive ImageJ plugin for SMLM data analysis and super-resolution imaging
      Java
      •
      GNU General Public License v3.0
      •45•0•0•0•Updated Apr 13, 2018Apr 13, 2018

    • ebfret-gui

      Public
      ebFRET (GUI version) – Empirical Bayes HMM analysis for multiple single-molecule FRET time series
      MATLAB
      •
      Other
      •9•0•0•0•Updated Feb 20, 2017Feb 20, 2017