Repositories list

• DeepOnto

  Public
  A package for ontology engineering with deep learning and language models.

  deep-learningontologieslanguage-model+ 2ontology-engineeringowlapi

  Python

  •

  Apache License 2.0

  •20•243•0•4•Updated Jul 28, 2025Jul 28, 2025

• OAEI-Bio-ML

  Public
  Dataset pointer and evaluation protocol for the Bio-ML Track of the OAEI.

  Python

  •

  Apache License 2.0

  •2•5•0•0•Updated Jul 23, 2025Jul 23, 2025

• FactProbe

  Public
  C++

  •

  Apache License 2.0

  •0•3•0•0•Updated Jul 8, 2025Jul 8, 2025

• HierarchyTransformers

  Public
  Language Models as Hierarchy Encoders

  transformershitlanguage-model+ 3sentence-transformershierarchy-encoderhierarchy-transformers

  Python

  •

  Apache License 2.0

  •6•28•0•0•Updated Apr 20, 2025Apr 20, 2025

• Guarded-saturation-experiments

  Public
  Experiments of the Guarded Saturation project.

  CSS

  •0•0•0•0•Updated Apr 1, 2025Apr 1, 2025

• Guarded-saturation

  Public
  Resolution-based rewriting algorithm from Guarded Tuple Generating Dependencies (GTGDs) to Datalog

  Java

  •

  MIT License

  •1•2•0•9•Updated Mar 3, 2025Mar 3, 2025

• BLINKout

  Public
  Out-of-KB mention discovery with BLINKout

  Python

  •

  MIT License

  •1•6•0•0•Updated Nov 15, 2024Nov 15, 2024

• LM-ontology-concept-placement

  Public
  Language Model based ontology concept placement

  taxonomiesontologiessnomed-ct+ 4concept-discoveryontology-enrichmentlarge-language-modelsconcept-placement

  Python

  •

  MIT License

  •0•8•0•0•Updated Nov 15, 2024Nov 15, 2024

• OET

  Public
  Ontology Enrichment from Texts (OET): A Biomedical Dataset for Concept Discovery and Placement

  Python

  •

  MIT License

  •0•6•0•0•Updated Oct 25, 2024Oct 25, 2024

• BERTMap

  Public
  BERTMap: A BERT-Based Ontology Alignment System

  ontology-matchingontology-alignmentcontextual-embeddings+ 1bert-fine-tuning

  Python

  •

  Apache License 2.0

  •6•65•0•0•Updated Apr 15, 2024Apr 15, 2024

• BoxSquaredEL

  Public
  Python

  •2•8•1•0•Updated Feb 17, 2024Feb 17, 2024

• OWL2Vec-Star

  Public
  Embedding OWL ontologies

  Python

  •

  Apache License 2.0

  •32•102•6•1•Updated Jan 9, 2024Jan 9, 2024

• LLMap-Prelim

  Public
  A preliminary investigation for ontology alignment (OM) with large language models (LLMs).

  ontologiesontology-alignmentlarge-language-models+ 2chatgptflan-t5

  Python

  •

  Apache License 2.0

  •1•5•0•0•Updated Sep 13, 2023Sep 13, 2023

• PAGOdA

  Public
  A conjunctive query answering engine over OWL 2 ontologies

  Java

  •1•5•4•0•Updated Feb 21, 2023Feb 21, 2023

• ACQuA

  Public
  OWL reasoner for CQ answering combining RSAComb, PAGOdA and a sprinkle of HermiT.

  owlcqhybrid-approach+ 3cq-answeringconjunctive-query-answeringowl-2-dl

  Java

  •

  Apache License 2.0

  •0•2•0•0•Updated Feb 21, 2023Feb 21, 2023

• RSAComb

  Public
  Re-implementation of the combined approach for CQ answering over RSA ontologies

  rsacqcq-answering+ 2conjunctive-query-answeringrole-safety-acyclic

  Scala

  •

  Apache License 2.0

  •0•2•10•0•Updated Oct 15, 2022Oct 15, 2022

• GNNQ

  Public
  Python

  •2•2•0•0•Updated Aug 11, 2022Aug 11, 2022

• Guarded-saturation-RDFox

  Public
  Java

  •0•0•0•0•Updated May 5, 2022May 5, 2022

• Guarded-saturation-DL-blow-up

  Public
  Java

  •0•0•0•0•Updated Oct 18, 2021Oct 18, 2021

• OntoAlign

  Public
  Codes relevant to ontology alignment

  Python

  •4•14•0•0•Updated Aug 25, 2021Aug 25, 2021

• KG_utilities

  Public
  Simple, makeshift utilities for manipulating knowledge graphs.

  Python

  •1•0•0•0•Updated Aug 5, 2021Aug 5, 2021