Repositories list

• spherical_deep_fixel

  Public
  DeepFixel: Deep learning-based identification of crossing fiber bundle elements

  Python

  •

  MIT License

  •2•0•0•0•Updated Jul 29, 2025Jul 29, 2025

• deep_fixel

  Public
  DeepFixel: Deep learning-based identification of crossing fiber bundle elements

  Python

  •

  MIT License

  •2•0•0•0•Updated Jul 29, 2025Jul 29, 2025

• slantticv_qc

  Public
  Statistical test methods for SLANT-TICV

  mribids-formatmri-segmentation+ 1t1-weighted-mri

  Python

  •1•0•0•0•Updated Jul 26, 2025Jul 26, 2025

• ADSP_AutoQA

  Public
  Automated QA for ADSP processing

  Python

  •

  MIT License

  •2•2•2•1•Updated Jul 17, 2025Jul 17, 2025

• brain_ventricle_icu

  Public
  Jupyter Notebook

  •1•0•0•0•Updated Jul 10, 2025Jul 10, 2025

• open_dive

  Public
  Open Diffusion Visualization for Everyone - BrainHack Vandy 2025

  Python

  •

  MIT License

  •8•6•3•3•Updated Jul 2, 2025Jul 2, 2025

• beyond_fa_3r

  Public
  Shell

  •

  MIT License

  •1•0•0•0•Updated Jul 1, 2025Jul 1, 2025

• DeepN4

  Public
  Jupyter Notebook

  •1•4•1•0•Updated Jun 28, 2025Jun 28, 2025

• tensor_metric_infonce_inference

  Public
  Python

  •1•0•0•0•Updated Jun 24, 2025Jun 24, 2025

• beyond_fa_pca

  Public
  Jupyter Notebook

  •1•0•0•0•Updated Jun 23, 2025Jun 23, 2025

• beyond_fa_md

  Public
  beyond fa challenge using md metric

  Python

  •

  MIT License

  •1•0•0•0•Updated Jun 23, 2025Jun 23, 2025

• GeneralQATool

  Public
  non-bids QA tool

  HTML

  •

  MIT License

  •0•0•0•0•Updated Jun 21, 2025Jun 21, 2025

• beyondfa_ad

  Public
  Shell

  •

  MIT License

  •1•0•0•0•Updated Jun 16, 2025Jun 16, 2025

• beyondfa_mix_clean

  Public
  Shell

  •

  MIT License

  •1•0•0•0•Updated Jun 16, 2025Jun 16, 2025

• beyondfa_microstruct_ad

  Public
  BFA Grand Challenge (axial diffusivity)

  Shell

  •

  MIT License

  •0•0•0•0•Updated Jun 16, 2025Jun 16, 2025

• RotNet-FA-Baseline

  Public
  Baseline algorithm for Beyond FA Challenge

  Python

  •0•0•0•0•Updated Jun 12, 2025Jun 12, 2025

• Informatics_ADSP

  Public
  Jupyter Notebook

  •

  MIT License

  •0•0•0•0•Updated Jun 10, 2025Jun 10, 2025

• Initial-HenryLi

  Public
  0•0•0•0•Updated Jun 3, 2025Jun 3, 2025

• HARFI_Singularity

  Public
  MIT License

  •0•0•0•0•Updated May 9, 2025May 9, 2025

• WM_learning_release

  Public
  Python

  •

  Other

  •0•6•1•0•Updated May 7, 2025May 7, 2025

• DA_CT_muscle_seg

  Public
  Python

  •

  Other

  •0•6•0•0•Updated May 1, 2025May 1, 2025

• DeepLungScreening

  Public
  Python

  •1•4•0•0•Updated Apr 29, 2025Apr 29, 2025

• map_t1_mapping

  Public
  Maximum a posteriori quantitative T1 mapping with uncertainty estimation and multi-inversion MP2RAGE

  Python

  •

  MIT License

  •0•0•0•0•Updated Apr 29, 2025Apr 29, 2025

• SLANTbrainSeg_TICV

  Public
  MATLAB

  •0•2•0•0•Updated Apr 24, 2025Apr 24, 2025

• mummy-s25

  Public
  Python

  •0•0•0•0•Updated Apr 20, 2025Apr 20, 2025

• vss_fmri

  Public
  Vasculature-informed spatial smoothing for fMRI

  Python

  •

  MIT License

  •0•2•0•0•Updated Apr 18, 2025Apr 18, 2025

• dss_fmri_atlas

  Public
  Diffusion-informed spatial smoothing fMRI atlas

  Python

  •

  MIT License

  •0•1•0•0•Updated Apr 18, 2025Apr 18, 2025

• BRAID

  Public
  BRain Age Identification from Diffusion MRI (BRAID)

  computer-visiondeep-learningmri

  Python

  •

  Other

  •2•2•0•0•Updated Apr 7, 2025Apr 7, 2025

• BeyondFA_eval

  Public
  Python

  •0•0•0•0•Updated Apr 6, 2025Apr 6, 2025

• beyond_fa_microstruct_baseline

  Public
  Microstructural baseline for BeyondFA challenge

  Shell

  •

  MIT License

  •0•2•0•0•Updated Apr 1, 2025Apr 1, 2025