Institute of Computational and Data Sciences at Penn State University

All

13 repositories

icds_docs
Public
ICDS User Guide
5•0•5•0•Updated Jan 31, 2025Jan 31, 2025
rc-example-jobs
Public
A collection of example jobs that researchers can use to get up to speed with running jobs on Roar Collab.
Shell
•4•0•1•1•Updated Jan 21, 2025Jan 21, 2025
iAsk_install_scripts
Public
installation scripts for Roar/Roar Collab
Shell
•1•0•0•0•Updated Dec 18, 2024Dec 18, 2024
roar-example-jobs
Public archive
A collection of example jobs that researchers can use to get up to speed with running jobs on Roar.
hpc batch-processing pbs roar-supercomputer
MATLAB
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MIT License
•2•0•0•0•Updated Feb 26, 2024Feb 26, 2024
icds-bookstack-html-importer
Public
Some scripts and an additional readme to help migrate content from Atlassian Confluence over to Bookstack. These are modifiied from Oddity Engineers Bookstack-HTML-Importer to better format titles and to add titles for cases in which the HTML export doesn't seem to provide them.
HTML
•0•0•0•0•Updated Sep 6, 2023Sep 6, 2023
iask_onboarding
Public
Code and tutorials to be used during the i-ASK onboarding sessions of Spring 2021
bash hpc docker anaconda singularity onboarding-sessions
Dockerfile
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GNU General Public License v3.0
•0•0•0•0•Updated May 27, 2022May 27, 2022
containers
Public
A collection of Dockerfiles and Singularity definition files used to build the containers that are used on the Roar cluster!
docker hpc singularity-containers roar-supercomputer apptainer
Dockerfile
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MIT License
•1•2•4•0•Updated Apr 27, 2022Apr 27, 2022
bulksubmit
Public
Bulk submit jobs on HPC systems using the TorquePBS job scheduler.
python command-line hpc-applications pbs
Python
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MIT License
•0•0•0•0•Updated Sep 28, 2021Sep 28, 2021
iaskutils
Public
A collection of various python scripts and tools used by the Penn State ICDS i-ASK helpdesk to help the users of the Roar supercomputer.
hpc torque python3 cli-app lmod pbs roar-supercomputer
Python
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MIT License
•1•1•2•0•Updated May 22, 2021May 22, 2021
torqueutils
Public
A simple set of tools for querying torque and processing XML!
python hpc xml xml-parsing cli-app roar-supercomputer torque
Python
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MIT License
•1•0•2•0•Updated Apr 20, 2021Apr 20, 2021
Roar_HPC_training
Public archive
C
•2•0•0•0•Updated Feb 16, 2021Feb 16, 2021
roar_bash_scripting_tutorial
Public
A repository for my presentation on bash scripting tips and tricks on the Roar cluster
shell bash bashrc hpc shell-scripting bash-scripting
GNU General Public License v3.0
•0•0•0•0•Updated Jan 24, 2021Jan 24, 2021
microbiome_workshop2020
Public archive
Module files, singularity definition files, any other code needed for the Microbiome summer workshop at Penn State University
Lua
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GNU General Public License v3.0
•0•0•0•0•Updated Jul 14, 2020Jul 14, 2020