Repositories list

• FEM_GEM

  Public
  0•0•0•0•Updated Sep 3, 2024Sep 3, 2024

• OVERLAY-Toolbox

  Public archive
  OVERLAY algorithm for context-specific GEM

  MATLAB

  •

  GNU General Public License v3.0

  •1•0•0•0•Updated Jan 13, 2024Jan 13, 2024

• PROSO-Toolbox

  Public
  MATLAB

  •

  GNU General Public License v3.0

  •1•2•0•0•Updated Dec 25, 2023Dec 25, 2023

• StressME

  Public
  Python

  •0•1•0•0•Updated Dec 22, 2023Dec 22, 2023

• iSD1509M

  Public
  Jupyter Notebook

  •0•0•0•0•Updated Jan 17, 2023Jan 17, 2023

• algal-pcFBA

  Public
  Jupyter Notebook

  •1•0•0•0•Updated Jan 12, 2023Jan 12, 2023

• APRILE-CaseStudies

  Public
  GNU General Public License v3.0

  •1•0•0•0•Updated Dec 3, 2021Dec 3, 2021

• APRILE

  Public
  APRILE: Adverse Polypharmacy Reaction Intelligent Learner and Explainer

  Python

  •

  MIT License

  •4•1•0•0•Updated Oct 6, 2021Oct 6, 2021

• APRILE-Exp

  Public
  This is the repository for reproducing results on APRILE-Exp in the paper "APRILE: Exploring the Molecular Mechanisms of Drug Side Effects with Explainable Graph Neural Networks".

  Jupyter Notebook

  •

  GNU General Public License v3.0

  •2•0•0•0•Updated Jul 3, 2021Jul 3, 2021

• APRILE-Pred

  Public
  PoSe-Model: A simplified TIP model for drug side effect prediction (Under development...)

  Jupyter Notebook

  •

  MIT License

  •1•0•0•0•Updated Mar 2, 2021Mar 2, 2021