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    6 repositories

    • cobramod

      Public
      CobraMod is a Python 3 open-source package which enables modifying and extending genome-scale metabolic models with metabolic pathway information from various metabolic pathways databases or user-curated data sets.
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •1•13•0•1•Updated Aug 6, 2024Aug 6, 2024

    • mmon-gcm

      Public
      MMON-GCM
      HTML
      •
      Apache License 2.0
      •1•1•0•0•Updated Jul 2, 2024Jul 2, 2024

    • escher-legacy

      Public
      Build, share, and embed visualizations of metabolic pathways.
      JavaScript
      •
      Other
      •76•0•0•1•Updated Feb 19, 2024Feb 19, 2024

    • Multiscale_Modelling_Phaeodactylum

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Feb 9, 2024Feb 9, 2024

    • Anatomical_Constraints_C4

      Public
      This repository stores the code and files associated with the "Development and analysis of mathematical models to study metabolic constraints and capacities in different photosynthetic types"
      Jupyter Notebook
      •0•1•0•0•Updated Nov 23, 2023Nov 23, 2023

    • Lectures

      Public
      Digital component of the teaching activities of the "Metabolic Reconstruction and Flux Modelling" research group.
      0•0•0•0•Updated Feb 15, 2023Feb 15, 2023