Repositories list

• segmentor

  Public
  stardist enabled as an arkitekt plugin

  Python

  •1•1•0•0•Updated Nov 6, 2024Nov 6, 2024

• mikro-napari

  Public
  napari within the mikro environment

  automationmicroscopynapari-plugin+ 2naparimicroscopy-data

  Python

  •0•0•0•0•Updated Jun 30, 2024Jun 30, 2024

• mikroj

  Public
  Fiji/ImageJ with mikro

  imagejfijimacros+ 1mikro

  Python

  •0•0•1•1•Updated Jun 9, 2024Jun 9, 2024

• arkitektio-imswitch

  Public
  ImSwitch is a software solution in Python that aims at generalizing microscope control by providing a solution for flexible control of multiple microscope modalities.

  Python

  •

  GNU General Public License v3.0

  •53•0•0•0•Updated Apr 10, 2024Apr 10, 2024

• kare

  Public
  CARE denoising enabled as an arkitekt plugin

  Python

  •0•0•0•0•Updated Feb 26, 2024Feb 26, 2024

• stdlib

  Public
  the standard library for arkitekt implementing some basic image processing algorithms

  Python

  •0•0•0•0•Updated Feb 17, 2024Feb 17, 2024

• .github

  Public
  0•0•1•0•Updated Feb 14, 2024Feb 14, 2024

• reaktor

  Public
  a distributed workflow scheduler for the arkitekt framework (plugin)

  Python

  •0•0•0•0•Updated Feb 12, 2024Feb 12, 2024

• omero-bridge

  Public
  a bridge to convert OMERO data to mikro

  Python

  •0•0•0•0•Updated Feb 12, 2024Feb 12, 2024

• gucker

  Public
  gucker is a simple gui app to watch folders and stream them to a connected arkitekt instance

  pyqt5actor-modelreactive-streams+ 1filewatcher

  Python

  •0•1•0•0•Updated Feb 12, 2024Feb 12, 2024

• mikro-manager

  Public
  a standalone wrapper for Micro-Manager enabling features on arkitekt

  Python

  •0•0•0•0•Updated Feb 12, 2024Feb 12, 2024

• omero

  Public
  conversion of bioformats compliant data to mikro data

  Python

  •0•0•0•0•Updated Oct 26, 2023Oct 26, 2023