bioinformatics-centre

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4 repositories

kaiju
Public
Fast taxonomic classification of metagenomic sequencing reads using a protein reference database
bioinformatics taxonomy next-generation-sequencing metagenomics taxonomic-classification
C
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GNU General Public License v3.0
•66•271•53•1•Updated Oct 26, 2024Oct 26, 2024
AsmVar
Public
A software for discovery, genotyping and characterization of structural variants
C++
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MIT License
•6•22•2•0•Updated Sep 11, 2024Sep 11, 2024
BayesTyper
Public
A method for variant graph genotyping based on exact alignment of k-mers
ngs bayesian-inference variant-calling gibbs-sampling structural-variation snvs dna-sequencing genotyping k-mers variant-graphs
C++
•7•87•37•0•Updated Apr 1, 2019Apr 1, 2019
bayesembler
Public
A Bayesian method for doing transcriptome assembly from RNA-seq data
C++
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MIT License
•5•25•8•0•Updated Feb 2, 2015Feb 2, 2015