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45 repositories
brainglobe-stitch
Public- brainglobe.info website
.github
Publicbrainglobe-napari-io
PublicRead and write files from the BrainGlobe neuroanatomy suitebrainglobe-segmentation
PublicSegmentation of anatomical structures in a common coordinate space- Automated 3D brain registration with support for multiple species and atlases.
brainglobe-atlasapi
PublicA lightweight python module to interact with atlases for systems neurosciencemorphapi
Publiccellfinder
PublicAutomated 3D cell detection in very large imagesbrainglobe-registration
Publicbrainglobe-heatmap
PublicRendering anatomical heatmaps with brainrender and matplotlibbrainglobe-meta
Publicbrainrender
Publica python based software for visualization of neuroanatomical and morphological data.brainglobe-utils
Publicstaged-recipes
Publicbrainglobe-workflows
Publicbrainrender-docs
Public archivenapari-experimental
Publicmicrometa
Public archivestack-to-chunk
Publicbg-atlasgen
Public archiveTools for packaging atlases for use with BrainGlobeimio
Public archiveLoading and saving of image data.brainreg-napari
Public archiveAutomated 3D brain registration in napari with support for multiple species and atlases.cellfinder-napari
Public archiveEfficient cell detection in large images using cellfinder in naparicellfinder-core
Public archiveStandalone cellfinder cell detection algorithm