Repositories list

• crick-viral-genomics

  Public
  Nextflow

  •0•0•0•0•Updated Nov 8, 2024Nov 8, 2024

• sequencing-demux

  Public
  Nextflow

  •0•0•3•0•Updated Nov 7, 2024Nov 7, 2024

• tools

  Public
  Python package with helper tools for the nf-core community.

  Python

  •

  MIT License

  •190•0•0•0•Updated Nov 7, 2024Nov 7, 2024

• plaque_assay

  Public
  Analysis code for covid-19 serology neutralisation assay.

  Python

  •

  MIT License

  •1•0•0•0•Updated Nov 6, 2024Nov 6, 2024

• hts_neutralisation_launcher

  Public
  Automate neutralisation analyses

  Python

  •1•0•0•0•Updated Nov 5, 2024Nov 5, 2024

• configs

  Public
  Config files used to define parameters specific to compute environments at different Institutions

  Nextflow

  •

  MIT License

  •272•0•0•0•Updated Aug 23, 2024Aug 23, 2024

• cutandrun

  Public
  Analysis pipeline for CUT&RUN and CUT&TAG experiments that includes QC, support for spike-ins, IgG controls, peak calling and downstream analysis.

  Nextflow

  •

  MIT License

  •47•0•0•0•Updated Apr 26, 2024Apr 26, 2024

• .github

  Public
  0•0•0•0•Updated Apr 25, 2024Apr 25, 2024

• slide-seq

  Public
  C++

  •4•0•0•0•Updated Apr 25, 2024Apr 25, 2024

• primer3-py

  Public
  Simple oligo analysis and primer design

  C

  •

  GNU General Public License v2.0

  •44•0•0•0•Updated Sep 7, 2023Sep 7, 2023