Repositories list

• freesurfer

  Public
  Neuroimaging analysis and visualization suite

  mrineuroimagingfreesurfer+ 1lcn

  C++

  •

  Other

  •261•706•22•13•Updated Aug 1, 2025Aug 1, 2025

• surfa

  Public
  Python utilities for medical image and surface-based analysis

  Python

  •11•31•3•1•Updated Jul 28, 2025Jul 28, 2025

• AutomatedFreeSurfer

  Public
  pythonbashautomation+ 3neuroimagingbrain-imagingfreesurfer

  Shell

  •2•10•0•0•Updated Jul 21, 2025Jul 21, 2025

• samseg

  Public
  Sequence Adaptive Multimodal SEGmentation (SAMSEG)

  probabilistic-modelsbrain-segmentationlesion-segmentation

  C++

  •6•12•2•0•Updated Jun 17, 2025Jun 17, 2025

• freebrowse

  Public
  Browser-based version of FreeView, built on top of niivue

  C#

  •

  Apache License 2.0

  •2•6•0•0•Updated Mar 13, 2025Mar 13, 2025

• explore_hdr_models

  Public
  Jupyter Notebook

  •0•0•0•0•Updated May 12, 2023May 12, 2023