Repositories list

• Binette

  Public
  A fast and accurate binning refinement tool to constructs high quality MAGs from the output of multiple binning tools.

  metagenomicsmicrobiologybioinformatics-tool+ 1metagenomics-binning

  Python

  •

  GNU General Public License v3.0

  •0•33•5•0•Updated Apr 28, 2025Apr 28, 2025

• dgenies

  Public
  Dotplot large Genomes in an Interactive, Efficient and Simple way

  genomeinracomparision+ 4dotplotgenotoulinraebioinformatics

  JavaScript

  •

  GNU General Public License v3.0

  •13•103•85•0•Updated Jan 7, 2025Jan 7, 2025

• Binette_TestData

  Public
  Test data for Binette. See https://github.com/genotoul-bioinfo/Binette

  Python

  •

  MIT License

  •0•0•0•0•Updated Nov 27, 2024Nov 27, 2024

• intronseeker-recipes

  Public
  Perl

  •1•0•0•0•Updated May 13, 2024May 13, 2024

• configs

  Public
  Config files used to define parameters specific to compute environments at different Institutions.

  Nextflow

  •

  MIT License

  •307•0•0•0•Updated Nov 26, 2019Nov 26, 2019

• rnaseq

  Public
  RNA sequencing analysis pipeline using STAR or HISAT2, with gene counts and quality control

  Nextflow

  •

  MIT License

  •753•0•0•0•Updated Oct 17, 2018Oct 17, 2018

• mipepcons

  Public
  0•0•0•0•Updated Apr 4, 2018Apr 4, 2018

• WorkflowFrameworkComparison

  Public
  Comparison / Hackathon on different workflow framework.

  inrabioinfo

  Python

  •

  GNU General Public License v3.0

  •1•1•0•0•Updated Dec 14, 2017Dec 14, 2017