Repositories list

• goldenberg-lab.github.io

  Public
  New lab website

  HTML

  •

  Other

  •0•0•0•0•Updated Feb 27, 2024Feb 27, 2024

• temporal_hydronephrosis

  Public
  Comparing spatiotemporal methods for modeling kidney ultrasounds taken over time, to predict obstructive hydronephrosis.

  Python

  •1•0•0•0•Updated Jun 25, 2022Jun 25, 2022

• lfs_prediction_app

  Public
  Predicts the probability of cancer before 6 using methylation data and visualizes it

  CSS

  •0•0•0•0•Updated May 27, 2022May 27, 2022

• GIproject

  Public
  Python

  •0•0•0•0•Updated Feb 3, 2022Feb 3, 2022

• SorenLiverDisease

  Public
  All of my code for "Machine Learning to Predict Compensated Cirrhosis" Project

  Python

  •1•0•0•0•Updated Jan 20, 2022Jan 20, 2022

• GICell

  Public
  Python

  •0•1•0•0•Updated Jan 13, 2022Jan 13, 2022

• Pyeloplasty

  Public
  Jupyter Notebook

  •0•0•0•0•Updated Jan 6, 2022Jan 6, 2022

• SAM

  Public
  Jupyter Notebook

  •0•0•0•0•Updated Dec 2, 2021Dec 2, 2021

• anonymize-slide

  Public
  Delete the label from a whole-slide image

  Python

  •

  GNU General Public License v2.0

  •45•0•0•0•Updated Nov 17, 2021Nov 17, 2021

• SNFtool_dev

  Public
  Development package for SNFtool

  R

  •0•2•0•0•Updated Jun 8, 2021Jun 8, 2021

• DearWatchCOVID-19

  Public
  ILI and COVID-19 detection using smart watches and surveys in collaboration with Evidation Health

  Python

  •

  Apache License 2.0

  •1•0•0•0•Updated May 18, 2021May 18, 2021

• NSQIP_codes

  Public
  Jupyter Notebook

  •2•1•0•0•Updated Mar 24, 2021Mar 24, 2021

• LFS_fibroblasts

  Public
  R

  •0•0•0•0•Updated Apr 7, 2020Apr 7, 2020

• lab_wiki

  Public
  Repo for storing lab guides

  0•0•0•0•Updated Mar 23, 2020Mar 23, 2020

• LFS-age-of-onset

  Public
  R

  •0•0•0•0•Updated Oct 23, 2019Oct 23, 2019

• missing_data_imputation

  Public
  This repo houses the pipeline for the missing data imputation project.

  R

  •1•0•0•0•Updated Jul 4, 2019Jul 4, 2019

• Jaryd_Drug_Deconvolution

  Public
  Estimate effect of individual genes on phenotypes of interest from observed drug screen data.

  R

  •0•0•0•0•Updated Jun 18, 2019Jun 18, 2019

• alspac-sleep-and-social-behaviour

  Public
  Implementations for SSM for Alspac Sleep data, and Sequential VAE for social behaviour data. Includes code for all preprocessing steps and plotting.

  Roff

  •0•0•0•0•Updated Mar 4, 2019Mar 4, 2019

• kulgap_app

  Public
  Shiny app code for computing and visualizing PDX trajectory data.

  Jupyter Notebook

  •0•0•0•0•Updated Nov 3, 2018Nov 3, 2018

• immunofluorescence_PCD

  Public
  Python

  •2•0•0•0•Updated Aug 31, 2018Aug 31, 2018

• HydroN

  Public
  Python

  •0•1•0•0•Updated May 8, 2018May 8, 2018

• echocg

  Public
  Python

  •0•0•0•0•Updated Apr 25, 2018Apr 25, 2018

• joint_gp_clustering

  Public
  Jupyter Notebook

  •0•0•0•0•Updated Nov 1, 2016Nov 1, 2016

• kingsley_diseaseMechanism

  Public
  Python

  •0•0•0•0•Updated Oct 11, 2016Oct 11, 2016

• modes-of-gene-regulation

  Public
  These are the scripts for the modes of gene reulation project

  R

  •0•0•0•0•Updated Aug 26, 2016Aug 26, 2016

• nc_aggregation

  Public
  R

  •0•0•0•0•Updated Aug 26, 2016Aug 26, 2016

• diseaseMechanism

  Public
  R

  •0•0•0•0•Updated May 26, 2016May 26, 2016