Repositories list

• panoptes

  Public
  Microservice for archiving images and framegrabs

  scalamicroserviceimages+ 1data-management

  Scala

  •

  Apache License 2.0

  •0•0•0•0•Updated Nov 9, 2024Nov 9, 2024

• raziel

  Public
  A centralized configuration server for MBARI's Video Annotation and Reference System (VARS)

  Scala

  •

  Apache License 2.0

  •0•0•0•0•Updated Nov 9, 2024Nov 9, 2024

• oni

  Public
  Organism Naming Infrastructure

  TSQL

  •0•0•3•0•Updated Nov 9, 2024Nov 9, 2024

• vampire-squid

  Public
  A video asset manager for tracking videos and camera deployments (e.g. ROV dives, AUV deployments)

  Scala

  •

  Apache License 2.0

  •1•5•0•0•Updated Nov 9, 2024Nov 9, 2024

• annosaurus

  Public
  Service for storing and retrieving video/image annotations from VARS

  Scala

  •

  Apache License 2.0

  •1•1•3•0•Updated Nov 9, 2024Nov 9, 2024

• aipipeline

  Public
  Library for running detection, clustering or classification ai pipelines plus performance monitoring

  image-classificationobject-detectionobject-tracking+ 1foundation-models

  Python

  •

  Apache License 2.0

  •0•2•0•0•Updated Nov 8, 2024Nov 8, 2024

• m3-quickstart

  Public
  A simple and quick method to run MBARI's Video Annotation and References System

  Python

  •1•2•9•0•Updated Nov 7, 2024Nov 7, 2024

• lrauv_backseat_python_template

  Public template
  Template repository for implementing the LRAUV Backseat LCM Interface

  Python

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Nov 6, 2024Nov 6, 2024

• SeafloorMappingDB

  Public
  Make MBARI seafloor mapping datasets more accessible and useful

  Python

  •

  GNU General Public License v3.0

  •6•3•25•0•Updated Nov 4, 2024Nov 4, 2024

• sinker-image-processing

  Public
  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated Nov 1, 2024Nov 1, 2024

• lcm-websocket-server

  Public
  WebSocket server for republishing LCM messages.

  middlewarewebsocketlcm

  Python

  •0•3•3•1•Updated Oct 31, 2024Oct 31, 2024

• kb

  Public
  Development repo for the VARS KB web app

  JavaScript

  •0•0•0•0•Updated Oct 29, 2024Oct 29, 2024

• sdcat

  Public
  Sliced Detection and Clustering Analysis Toolkit

  uavdroneclustering+ 7object-detectionplanktonsahideepseayolov5hdbscan-clustering-algorithmyolov8

  Python

  •0•5•4•0•Updated Oct 29, 2024Oct 29, 2024

• fastapi-vss

  Public
  RESTful API for vector similarity search. It uses the Python web framework FastAPI. This accelerates machine learning workflows that require vector similarity search using foundational models.

  image-classificationfastapivision-transformer+ 1foundation-models

  Python

  •

  Apache License 2.0

  •0•2•0•0•Updated Oct 28, 2024Oct 28, 2024

• qgeomap

  Public
  A Quasar component for geometry viewing and editing

  Vue

  •0•1•0•1•Updated Oct 24, 2024Oct 24, 2024

• voc-cropper

  Public
  A simple utility to crop from PNG or JPEG images bounding box annotations in PASCAL VOC formatted annotations. This is useful to extract images (and resize them) for classification or clustering

  classificationpascal-voc

  Python

  •0•3•0•0•Updated Oct 22, 2024Oct 22, 2024

• auvstatus

  Public
  LRAUV status widgets

  Python

  •0•2•37•0•Updated Oct 10, 2024Oct 10, 2024

• fastapi-yolov5

  Public
  YOLOv5 Machine Learning API powered by the FastAPI framework

  cdkfastapiyolov5

  Python

  •

  GNU General Public License v3.0

  •2•3•2•0•Updated Oct 5, 2024Oct 5, 2024

• vars-gridview

  Public
  VARS GridView is a tool for reviewing and correcting VARS localizations in bulk.

  Python

  •

  MIT License

  •0•2•22•0•Updated Oct 2, 2024Oct 2, 2024

• kclassify

  Public
  Tensorflow-Keras image classifier for transfer-learning training either locally or in AWS SageMaker.

  Python

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Sep 29, 2024Sep 29, 2024

• auto-plankton-training

  Public
  Python

  •1•2•0•0•Updated Sep 27, 2024Sep 27, 2024

• pbp

  Public
  Process ocean audio data archives to daily analysis products of hybrid millidecade spectra using PyPAM.

  dockercloudnotebook+ 4soundscapeaudio-processinghybrid-millidecade-bandspypam

  Python

  •3•11•13•0•Updated Sep 23, 2024Sep 23, 2024

• pbp-jupyter

  Public
  Creating and using a Jupyter environment with the mbari-pbp package already installed

  Just

  •0•1•0•0•Updated Sep 20, 2024Sep 20, 2024

• pbp-binder

  Public
  PBP for mybinder

  Jupyter Notebook

  •

  BSD 3-Clause "New" or "Revised" License

  •0•1•0•0•Updated Sep 20, 2024Sep 20, 2024

• charybdis

  Public
  A video annotation query server that integrates Annosaurus and Vampire-squid

  Java

  •0•0•0•1•Updated Sep 11, 2024Sep 11, 2024

• blaise

  Public
  A utility to crop images according to given annotations ("blazingly fast")

  rustimage-processingclassification+ 1pascal-voc

  Rust

  •0•2•0•0•Updated Sep 4, 2024Sep 4, 2024

• sbtnatimage

  Public
  Simple project to exercise sbt-native-image along with Github Actions to create binary releases for Linux, MacOS, and Windows

  Scala

  •

  Apache License 2.0

  •0•0•0•0•Updated Sep 4, 2024Sep 4, 2024

• ecoz2rs

  Public
  ECOZ2 in Rust

  hmmsupervised-learningk-means+ 5unsupervised-learninghidden-markov-modelsvector-quantizationlinear-predictive-codingsignal-recognition

  Rust

  •0•4•0•0•Updated Sep 4, 2024Sep 4, 2024

• fastapi-tator

  Public
  RESTful API for bulk operations on a Tator database on clustered, labeled, localization data. It uses the Python web framework FastAPI.

  fastapi

  Python

  •

  Apache License 2.0

  •0•1•0•0•Updated Sep 4, 2024Sep 4, 2024

• pbp-doc

  Public
  Sources for https://docs.mbari.org/pbp/

  Just

  •0•2•1•0•Updated Aug 26, 2024Aug 26, 2024