Repositories list

• impc-etl

  Public
  IMPC ETL Process

  Python

  •

  Apache License 2.0

  •6•2•12•0•Updated Dec 18, 2024Dec 18, 2024

• orthology-database

  Public
  PLpgSQL

  •

  Apache License 2.0

  •0•0•0•0•Updated Dec 17, 2024Dec 17, 2024

• impc-mousephenotype-web

  Public
  IMPC mousephenotype.org data site implementation

  JavaScript

  •1•0•12•0•Updated Dec 17, 2024Dec 17, 2024

• gentar-reference-data

  Public
  PLpgSQL

  •1•0•0•0•Updated Dec 17, 2024Dec 17, 2024

• orthology-api

  Public
  API service for the orthology database

  HTML

  •

  Apache License 2.0

  •1•1•0•0•Updated Dec 16, 2024Dec 16, 2024

• essential-genes-database

  Public
  Data base load scripts to support the IMPC Essential Genes portal

  Shell

  •

  Apache License 2.0

  •0•0•0•0•Updated Dec 13, 2024Dec 13, 2024

• impc-production-tracker

  Public
  This repository will host the code for the new and improved IMPC effort production tracker. This is a successor to iMits, which started life as the ESCell production tracking database for the IMPC project.

  Java

  •

  Apache License 2.0

  •8•1•28•2•Updated Dec 12, 2024Dec 12, 2024

• webapp-impc-production-tracker

  Public
  Angular app for the impc-production-tracker

  TypeScript

  •7•1•4•1•Updated Dec 12, 2024Dec 12, 2024

• impc-batch-query-service

  Public
  API Service for the Batch Query Interface

  Python

  •

  Apache License 2.0

  •0•0•0•0•Updated Dec 6, 2024Dec 6, 2024

• impc_stats_pipeline

  Public
  R packages for the stats pipeline

  R

  •

  Apache License 2.0

  •2•0•24•1•Updated Dec 2, 2024Dec 2, 2024

• impc-api

  Public
  IMPC SOLR API Python helper module.

  Python

  •

  Apache License 2.0

  •0•0•1•0•Updated Nov 19, 2024Nov 19, 2024

• impc-solr-documentation

  Public
  A repository for documentation of the IMPC Solr API cores

  HTML

  •

  Apache License 2.0

  •0•0•0•0•Updated Nov 18, 2024Nov 18, 2024

• impc-data-api-workshop

  Public
  Repository to store material for the IMPC Data API workshop.

  Jupyter Notebook

  •

  Apache License 2.0

  •0•0•0•0•Updated Nov 14, 2024Nov 14, 2024

• impc_working_group_data

  Public
  Jupyter Notebook

  •

  Apache License 2.0

  •0•0•0•0•Updated Nov 11, 2024Nov 11, 2024

• PhenotypeData

  Public
  Reorganisation, update, and extend code from PhenotypeArchive

  Java

  •

  Apache License 2.0

  •5•2•152•1•Updated Oct 22, 2024Oct 22, 2024

• gentar_status_updater

  Public
  An application to migrate the state of a phenotyping plan in GenTaR

  Python

  •

  Apache License 2.0

  •0•0•1•0•Updated Sep 19, 2024Sep 19, 2024

• mi-threei-web

  Public
  TypeScript

  •0•0•0•0•Updated Sep 4, 2024Sep 4, 2024

• gentar_distribution_id_updater

  Public
  An application to add distribution identifiers to colonies in GenTaR that is designed for use by stock centres.

  Python

  •

  Apache License 2.0

  •0•0•0•0•Updated Jun 21, 2024Jun 21, 2024

• LAMA

  Public
  Automatic phenotyping tool for 3D images

  Python

  •

  Other

  •6•5•1•12•Updated Jun 5, 2024Jun 5, 2024

• impc-reference-harvester

  Public
  IMPC Reference harvester

  Python

  •

  Apache License 2.0

  •1•0•0•0•Updated Oct 3, 2023Oct 3, 2023

• impc-parquet2solr

  Public
  Spark application to convert parquet files to solr cores

  Java

  •

  Apache License 2.0

  •0•0•0•2•Updated Sep 21, 2023Sep 21, 2023

• aws-mpi2

  Public
  Repo for AWS documentation and tickets

  Apache License 2.0

  •0•0•6•0•Updated Aug 21, 2023Aug 21, 2023

• impc-application

  Public
  A repository containing YAML files to describe the IMPC application for argoCD

  Apache License 2.0

  •0•0•0•0•Updated Aug 2, 2023Aug 2, 2023

• impc-mousephenotype-api

  Public
  API for mousephenotype.org

  Java

  •1•0•0•0•Updated May 31, 2023May 31, 2023

• impc-data-labs

  Public
  Collection of Data extraction and Data Transformation scripts for IMPC Data sources

  Jupyter Notebook

  •

  Apache License 2.0

  •0•0•0•0•Updated May 4, 2023May 4, 2023

• EBI02126-web-developer

  Public
  0•0•0•0•Updated Apr 26, 2023Apr 26, 2023

• impc-consensus-score-paper

  Public
  A repository to hold the data and results of the paper "A consensus score to combine inferences from multiple centres"

  R

  •

  Apache License 2.0

  •0•0•0•0•Updated Mar 6, 2023Mar 6, 2023

• imits

  Public
  The International Micro-Injection Tracking System (iMits)

  Ruby

  •

  Other

  •0•3•3•5•Updated Jan 27, 2023Jan 27, 2023

• impc-publication-curation

  Public
  IMPC publications curation app

  TypeScript

  •1•0•5•28•Updated Jan 7, 2023Jan 7, 2023

• HARP

  Public
  Harwell Automated Reconstruction Processor

  Python

  •1•2•2•1•Updated Nov 22, 2022Nov 22, 2022