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    74 repositories

    • library-plugins

      Public
      Stores a list of the repos that are included in the QIIME 2 library
      BSD 3-Clause "New" or "Revised" License
      •5•0•0•2•Updated Jan 17, 2025Jan 17, 2025

    • library

      Public
      A website for sharing QIIME 2 Plugins
      Svelte
      •
      BSD 3-Clause "New" or "Revised" License
      •1•0•3•0•Updated Jan 17, 2025Jan 17, 2025

    • distributions

      Public
      Makefile
      •
      BSD 3-Clause "New" or "Revised" License
      •5•1•5•1•Updated Jan 17, 2025Jan 17, 2025

    • action-library-packaging

      Public
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •5•0•0•1•Updated Jan 16, 2025Jan 16, 2025

    • qiime2

      Public
      Official repository for the QIIME 2 framework.
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •241•483•63•8•Updated Jan 16, 2025Jan 16, 2025

    • q2-dada2

      Public
      QIIME 2 plugin wrapping DADA2
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •37•20•11•3•Updated Jan 16, 2025Jan 16, 2025

    • q2cli

      Public
      Command line interface for QIIME 2
      hacktoberfestq2interface
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •24•19•14•1•Updated Jan 16, 2025Jan 16, 2025

    • q2-demux

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •20•0•10•1•Updated Jan 15, 2025Jan 15, 2025

    • q2-cutadapt

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •18•3•3•1•Updated Jan 13, 2025Jan 13, 2025

    • q2-composition

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •27•6•7•2•Updated Jan 13, 2025Jan 13, 2025

    • docs

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •58•21•31•0•Updated Jan 10, 2025Jan 10, 2025

    • q2-types

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •41•17•26•3•Updated Jan 9, 2025Jan 9, 2025

    • q2-vsearch

      Public
      vsearch plugin for QIIME 2
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •20•6•10•2•Updated Jan 8, 2025Jan 8, 2025

    • q2-vizard

      Public
      The first choice of wizard lizards for interactive, generalized microbiome data visualization!
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •9•1•6•1•Updated Jan 8, 2025Jan 8, 2025

    • q2-taxa

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •29•3•43•0•Updated Jan 8, 2025Jan 8, 2025

    • q2-stats

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •8•1•2•1•Updated Jan 8, 2025Jan 8, 2025

    • q2-sample-classifier

      Public
      QIIME 2 plugin for machine learning prediction of sample data.
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •36•6•15•0•Updated Jan 8, 2025Jan 8, 2025

    • q2-quality-filter

      Public
      Quality filtering for QIIME2
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •16•1•3•1•Updated Jan 8, 2025Jan 8, 2025

    • q2-quality-control

      Public
      A QIIME 2 plugin for quality control of sequence and feature data
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •17•4•8•0•Updated Jan 8, 2025Jan 8, 2025

    • q2-phylogeny

      Public
      Phylogenetic reconstruction, and operations on phylogenetic trees.
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •19•4•2•0•Updated Jan 8, 2025Jan 8, 2025

    • q2-mystery-stew

      Public
      This plugin exists to define integration tests between interfaces and the framework.
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •6•0•0•0•Updated Jan 8, 2025Jan 8, 2025

    • q2-metadata

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •17•3•6•0•Updated Jan 8, 2025Jan 8, 2025

    • q2-longitudinal

      Public
      QIIME 2 plugin for paired sample comparisons
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •18•9•30•1•Updated Jan 8, 2025Jan 8, 2025

    • q2-fragment-insertion

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •17•13•11•0•Updated Jan 8, 2025Jan 8, 2025

    • q2-feature-table

      Public
      QIIME 2 plugin supporting operations on feature tables.
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •37•2•25•2•Updated Jan 8, 2025Jan 8, 2025

    • q2-feature-classifier

      Public
      QIIME 2 plugin supporting taxonomic classification
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •38•18•8•0•Updated Jan 8, 2025Jan 8, 2025

    • q2-emperor

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •22•1•4•0•Updated Jan 8, 2025Jan 8, 2025

    • q2-diversity-lib

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •11•0•6•0•Updated Jan 8, 2025Jan 8, 2025

    • q2-diversity

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •45•4•45•0•Updated Jan 8, 2025Jan 8, 2025

    • q2-deblur

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •22•2•7•1•Updated Jan 8, 2025Jan 8, 2025