Repositories list

• FoldX_ibex

  Public
  Wrapper for running FoldX in ibex

  Python

  •

  MIT License

  •0•0•0•0•Updated Sep 28, 2024Sep 28, 2024

• alphafold

  Public
  Open source code for AlphaFold.

  Python

  •

  Apache License 2.0

  •2.3k•1•0•0•Updated Sep 17, 2024Sep 17, 2024

• AlphaCRV

  Public
  Pipeline for Identifying Accurate Binder Topologies in Mass-Modeling with AlphaFold

  Python

  •

  GNU General Public License v3.0

  •0•3•0•0•Updated Sep 17, 2024Sep 17, 2024

• stats_tests_variants

  Public
  Python

  •0•0•0•0•Updated May 21, 2024May 21, 2024

• multiprot

  Public
  Model proteins with multiple domains

  Python

  •

  GNU General Public License v3.0

  •1•6•14•0•Updated Jan 22, 2024Jan 22, 2024

• roboRNA

  Public
  Tecan Evo automatic RNA extraction and diagnostics protocols

  0•0•0•0•Updated Mar 13, 2023Mar 13, 2023

• esm

  Public
  Evolutionary Scale Modeling (esm): Pretrained language models for proteins

  Python

  •

  MIT License

  •642•0•0•0•Updated Nov 4, 2022Nov 4, 2022

• CoolerCodonOpt

  Public
  Codon optimization scripts using the dnachisel library

  Python

  •

  MIT License

  •1•3•2•0•Updated Jun 16, 2022Jun 16, 2022

• dropletXpress

  Public
  Supplemental Data for Restrepo et al. cell-free expression in microfluidic droplets

  MATLAB

  •0•0•0•0•Updated Jun 13, 2021Jun 13, 2021

• paper_latex_template

  Public template
  publication (latex) of robotic RNA extraction

  TeX

  •0•0•0•0•Updated Mar 22, 2021Mar 22, 2021

• protocols

  Public
  template for management of experimental projects

  2•0•0•0•Updated Mar 12, 2019Mar 12, 2019

• kinaseexpress

  Public
  Supplemental Material for Diaz Galicia et al. 2019

  Apache License 2.0

  •0•0•0•0•Updated Dec 29, 2018Dec 29, 2018

• wetproject

  Public template
  template for management of experimental projects

  1•0•5•0•Updated Aug 30, 2018Aug 30, 2018