Repositories list

• fanc

  Public
  FAN-C: Framework for the ANalysis of C-like data

  Python

  •

  GNU General Public License v3.0

  •14•107•98•1•Updated Mar 13, 2024Mar 13, 2024

• chess-2021

  Public
  HTML

  •

  MIT License

  •0•3•0•0•Updated Oct 25, 2023Oct 25, 2023

• chess

  Public
  Comparison of Hi-C Experiments using Structural Similarity.

  hi-ccomparative-genomicschromatin+ 2structural-similaritychromatin-organisation

  Python

  •

  Other

  •6•26•19•0•Updated Jul 18, 2023Jul 18, 2023

• tadtool

  Public
  TADtool is an interactive tool for the identification of meaningful parameters in TAD-calling algorithms for Hi-C data.

  Python

  •

  MIT License

  •13•43•8•0•Updated Nov 16, 2022Nov 16, 2022

• Chang_et_al_Zebrafish_TEs

  Public
  Jupyter Notebook

  •4•10•0•0•Updated Nov 18, 2021Nov 18, 2021

• Ing-Simmons_et_al_dorsoventral_3D_genome

  Public
  Python

  •

  MIT License

  •4•6•0•0•Updated Apr 13, 2021Apr 13, 2021

• genomic_regions

  Public
  Python

  •

  MIT License

  •0•0•0•0•Updated Mar 24, 2021Mar 24, 2021

• fanc-manuscript

  Public
  Python

  •0•2•0•0•Updated Oct 23, 2020Oct 23, 2020

• zebrafish-3D-genome

  Public
  0•0•0•0•Updated May 25, 2020May 25, 2020

• Hug-et-al-Cell-2017-Supp-Site

  Public
  Supplementary site for Hug CB, Grimaldi AG, Kruse K, Vaquerizas JM. (2017).

  0•3•0•0•Updated May 18, 2017May 18, 2017