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    9 repositories

    • Methods

      Public
      computational-methods
      C++
      •1•1•0•0•Updated Apr 9, 2019Apr 9, 2019

    • integrative-analysis

      Public
      TORUS and LDSC script
      Shell
      •0•0•0•0•Updated Feb 11, 2019Feb 11, 2019

    • scRNAseqData

      Public
      R
      •0•0•0•0•Updated Feb 11, 2019Feb 11, 2019

    • st_viewer

      Public
      A GUI tool for easy and smooth visualisation and analysis of Spatial Transcriptomics datasets
      C++
      •
      Other
      •14•0•0•0•Updated Sep 21, 2018Sep 21, 2018

    • DataAnalysis

      Public
      UKBiobankAnalysis
      C++
      •0•1•0•0•Updated Jul 25, 2018Jul 25, 2018

    • kallisto

      Public
      Near-optimal RNA-Seq quantification
      C
      •
      BSD 2-Clause "Simplified" License
      •172•0•0•0•Updated May 17, 2018May 17, 2018

    • sleuth

      Public
      Differential analysis of RNA-Seq
      R
      •
      GNU General Public License v3.0
      •95•0•0•0•Updated May 3, 2018May 3, 2018

    • data-store

      Public
      Design specs and prototypes for the HCA Data Storage System ("blue box")
      Python
      •
      MIT License
      •6•0•0•0•Updated Apr 22, 2018Apr 22, 2018

    • aggregationDE

      Public
      Scripts and software supplement for "Gene-level differential analysis at transcript-level resolution" by Yi, Pimentel, Bray and Pachter
      R
      •
      GNU General Public License v3.0
      •5•0•0•0•Updated Feb 20, 2018Feb 20, 2018