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    • yapic

      Public
      Yet Another Pixel Classifier (based on deep learning)
      Python
      GNU General Public License v3.0
      835141Updated Jun 27, 2024Jun 27, 2024
    • Image segmentation prediction tool that uses trained YAPiC model and performs image segmentation directly in Napari.
      Python
      GNU General Public License v3.0
      4011Updated Sep 19, 2022Sep 19, 2022
    • Napari plugin to store Napari projects in a .h5 file. Label layer are stored in a sparse representation (COO list).
      Python
      GNU General Public License v3.0
      4131Updated Sep 19, 2022Sep 19, 2022
    • yapic_io

      Public
      I/O data handling module for various image sources. Mainly to provide data interface for supervised pixel classification tools
      Python
      GNU General Public License v3.0
      5140Updated Jan 3, 2022Jan 3, 2022
    • pyilastik

      Public
      Python connector for hdf5 ilastik project files
      Python
      GNU General Public License v3.0
      3101Updated Oct 26, 2021Oct 26, 2021
    • bigtiff

      Public
      A sliced reader and writer for TIFF
      Python
      GNU General Public License v3.0
      0010Updated May 15, 2019May 15, 2019
    • A Cython package for LZW decompression (required for TIFF)
      Python
      GNU General Public License v3.0
      0000Updated Apr 15, 2019Apr 15, 2019