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ozanciga authored Nov 27, 2020
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# self-supervised-histopathology
Pretrained model for self supervised histopathology
# Self supervised learning for digital histopathology

## Sample clustering results

<table border="0">
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<td><img src="https://raw.githubusercontent.com/ozanciga/self-supervised-histopathology/main/rand.png" data-canonical-src="https://raw.githubusercontent.com/ozanciga/self-supervised-histopathology/main/rand.png" width="300" height="300" /></td>
<td><img src="https://raw.githubusercontent.com/ozanciga/self-supervised-histopathology/main/clusters.png" data-canonical-src="https://raw.githubusercontent.com/ozanciga/self-supervised-histopathology/main/clusters.png" width="300" height="300" />
</tr>
<tr>
</td>
<td><b style="font-size:30px">Random sampling</b></td>
<td>Sampling using K-means clustering of learned features</td>
</tr>
</table>



<table border="0">
<tr>
<td><img src="https://raw.githubusercontent.com/ozanciga/self-supervised-histopathology/main/Selfsupunsupervisedimagesamples-1.png" width="300" height="150" /></td>
<td><img src="https://raw.githubusercontent.com/ozanciga/self-supervised-histopathology/main/Selfsupunsupervisedimagesamples-2.png" width="300" height="150" /></td>
<td><img src="https://raw.githubusercontent.com/ozanciga/self-supervised-histopathology/main/Selfsupunsupervisedimagesamples-3.png" width="300" height="150" /></td>
</tr>
</table>



## Pretrained model for self supervised histopathology

You can download the model here, named **_ckpt_epoch_9.ckpt**:
https://github.com/ozanciga/self-supervised-histopathology/releases/tag/1
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