Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Bump mambaorg/micromamba from 1.4.3 to 1.5.10 in /containers #121

Closed
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
Bump mambaorg/micromamba from 1.4.3 to 1.5.10 in /containers
Bumps mambaorg/micromamba from 1.4.3 to 1.5.10.

---
updated-dependencies:
- dependency-name: mambaorg/micromamba
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
  • Loading branch information
dependabot[bot] authored Sep 23, 2024
commit 599e90acca1e80c09c430d0fdc13e9e11343dfd9
2 changes: 1 addition & 1 deletion containers/cluster-profiler__v4.8.1.Dockerfile
Original file line number Diff line number Diff line change
@@ -2,7 +2,7 @@
#
# SPDX-License-Identifier: MIT

FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:1.5.10 AS base

ARG CONTAINER_VERSION

2 changes: 1 addition & 1 deletion containers/comparative-analysis__v1.0.0.Dockerfile
Original file line number Diff line number Diff line change
@@ -2,7 +2,7 @@
#
# SPDX-License-Identifier: MIT

FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:1.5.10 AS base

ARG CONTAINER_VERSION

2 changes: 1 addition & 1 deletion containers/cooltools__v0.5.4.Dockerfile
Original file line number Diff line number Diff line change
@@ -2,7 +2,7 @@
#
# SPDX-License-Identifier: MIT

FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:1.5.10 AS base

ARG MAMBA_DOCKERFILE_ACTIVATE=1

2 changes: 1 addition & 1 deletion containers/dchic__vd4eb244.Dockerfile
Original file line number Diff line number Diff line change
@@ -30,7 +30,7 @@ RUN apt-get update \
&& chmod 755 dchic/dchicf.r


FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:1.5.10 AS base

ARG CONTAINER_VERSION

2 changes: 1 addition & 1 deletion containers/diff-expression-analysis__v1.0.0.Dockerfile
Original file line number Diff line number Diff line change
@@ -2,7 +2,7 @@
#
# SPDX-License-Identifier: MIT

FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:1.5.10 AS base

ARG CONTAINER_VERSION

2 changes: 1 addition & 1 deletion containers/diffdomain__v1c4b3db.Dockerfile
Original file line number Diff line number Diff line change
@@ -19,7 +19,7 @@ RUN apt-get update \
&& find diffdomain -type f -exec chmod uga+r {} + \
&& find diffdomain -type d -exec chmod uga+rx {} +

FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:1.5.10 AS base

ARG MAMBA_DOCKERFILE_ACTIVATE=1

2 changes: 1 addition & 1 deletion containers/hic-balancing__v1.0.1.Dockerfile
Original file line number Diff line number Diff line change
@@ -61,7 +61,7 @@ RUN cd /tmp/hic2cool-ng*/ \
&& cmake --install build


FROM mambaorg/micromamba:1.5.8-jammy AS base
FROM mambaorg/micromamba:1.5.10-jammy AS base

ARG CONTAINER_TITLE
ARG CONTAINER_VERSION
4 changes: 2 additions & 2 deletions containers/hic-breakfinder__v30a0dcc.Dockerfile
Original file line number Diff line number Diff line change
@@ -2,7 +2,7 @@
#
# SPDX-License-Identifier: MIT

FROM mambaorg/micromamba:1.4.3 AS builder
FROM mambaorg/micromamba:1.5.10 AS builder

ARG CONTAINER_VERSION

@@ -33,7 +33,7 @@ RUN cd hic_breakfinder \
&& make -j $(nproc)


FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:1.5.10 AS base

ARG CONTAINER_VERSION

2 changes: 1 addition & 1 deletion containers/hicexplorer__v3.7.2.Dockerfile
Original file line number Diff line number Diff line change
@@ -2,7 +2,7 @@
#
# SPDX-License-Identifier: MIT

FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:1.5.10 AS base

ARG MAMBA_DOCKERFILE_ACTIVATE=1

2 changes: 1 addition & 1 deletion containers/hictrans__ve26ad6a.Dockerfile
Original file line number Diff line number Diff line change
@@ -15,7 +15,7 @@ RUN apt-get update \
&& git checkout "$HICTRANS_VERSION"


FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:1.5.10 AS base

ARG CONTAINER_VERSION

2 changes: 1 addition & 1 deletion containers/hint__v2.2.8.Dockerfile
Original file line number Diff line number Diff line change
@@ -12,7 +12,7 @@ RUN apt-get update \
&& curl -L "$BICSEQ2_SEG_URL" | tar -xzf -


FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:1.5.10 AS base

ARG CONTAINER_VERSION

2 changes: 1 addition & 1 deletion containers/image-analysis__v1.0.0.Dockerfile
Original file line number Diff line number Diff line change
@@ -2,7 +2,7 @@
#
# SPDX-License-Identifier: MIT

FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:1.5.10 AS base

ARG CONTAINER_VERSION

2 changes: 1 addition & 1 deletion containers/macs2__v2.2.9.1.Dockerfile
Original file line number Diff line number Diff line change
@@ -2,7 +2,7 @@
#
# SPDX-License-Identifier: MIT

FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:1.5.10 AS base

ARG CONTAINER_VERSION
ARG MAMBA_DOCKERFILE_ACTIVATE=1
2 changes: 1 addition & 1 deletion containers/maxhic__vb553b8f.Dockerfile
Original file line number Diff line number Diff line change
@@ -21,7 +21,7 @@ RUN apt-get update \

RUN if [ -z "$CONTAINER_VERSION" ]; then echo "Missing CONTAINER_VERSION --build-arg" && exit 1; fi

FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:1.5.10 AS base

ARG MAMBA_DOCKERFILE_ACTIVATE=1

2 changes: 1 addition & 1 deletion containers/microarray-analysis__v1.0.0.Dockerfile
Original file line number Diff line number Diff line change
@@ -2,7 +2,7 @@
#
# SPDX-License-Identifier: MIT

FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:1.5.10 AS base

ARG MAMBA_DOCKERFILE_ACTIVATE=1

2 changes: 1 addition & 1 deletion containers/plotting__v1.0.0.Dockerfile
Original file line number Diff line number Diff line change
@@ -2,7 +2,7 @@
#
# SPDX-License-Identifier: MIT

FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:1.5.10 AS base

ARG MAMBA_DOCKERFILE_ACTIVATE=1

2 changes: 1 addition & 1 deletion containers/pyutils__v1.0.1.Dockerfile
Original file line number Diff line number Diff line change
@@ -2,7 +2,7 @@
#
# SPDX-License-Identifier: MIT

FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:1.5.10 AS base

ARG MAMBA_DOCKERFILE_ACTIVATE=1

2 changes: 1 addition & 1 deletion containers/seqkit__v2.5.1.Dockerfile
Original file line number Diff line number Diff line change
@@ -2,7 +2,7 @@
#
# SPDX-License-Identifier: MIT

FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:1.5.10 AS base

ARG CONTAINER_VERSION
ARG MAMBA_DOCKERFILE_ACTIVATE=1
2 changes: 1 addition & 1 deletion containers/wiggletools__v1.2.11.Dockerfile
Original file line number Diff line number Diff line change
@@ -2,7 +2,7 @@
#
# SPDX-License-Identifier: MIT

FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:1.5.10 AS base

ARG CONTAINER_VERSION
ARG MAMBA_DOCKERFILE_ACTIVATE=1
Loading