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Fix update_version() if-else [skip ci]
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seananderson committed Mar 21, 2024
1 parent 35ece2f commit a298edb
Showing 1 changed file with 19 additions and 19 deletions.
38 changes: 19 additions & 19 deletions R/utils.R
Original file line number Diff line number Diff line change
Expand Up @@ -614,26 +614,26 @@ update_version <- function(object) {
d[["__sdmTMB_offset__"]] <- d[["__dcens_upr__"]] <- NULL
d <- d[seq(1, real_data_n), , drop = FALSE]
object$data <- d
}

# add gengamma_Q
p <- object$tmb_obj$env$parList()
if (!"gengamma_Q" %in% names(p)) {
p$gengamma_Q <- 1 # not defined at 0
ee <- object$tmb_obj$env
map <- object$tmb_map
map$gengamma_Q <- factor(NA)
object$tmb_obj <- TMB::MakeADFun(
data = ee$data,
parameters = p,
map = map,
random = ee$random,
silent = ee$silent,
DLL = "sdmTMB"
)
object$tmb_obj$fn(object$model$par)
object$tmb_obj$env$last.par.best <- ee$last.par.best
object$tmb_map <- map
}
# add gengamma_Q
p <- object$tmb_obj$env$parList()
if (!"gengamma_Q" %in% names(p)) {
p$gengamma_Q <- 1 # not defined at 0
ee <- object$tmb_obj$env
map <- object$tmb_map
map$gengamma_Q <- factor(NA)
object$tmb_obj <- TMB::MakeADFun(
data = ee$data,
parameters = p,
map = map,
random = ee$random,
silent = ee$silent,
DLL = "sdmTMB"
)
object$tmb_obj$fn(object$model$par)
object$tmb_obj$env$last.par.best <- ee$last.par.best
object$tmb_map <- map
}
object
}

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