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pdimens · Dec 4, 2024 · 5bc9ee6 · 5bc9ee6
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diff --git a/404.html b/404.html
@@ -4,7 +4,7 @@
     <meta charset="UTF-8">
     <meta name="viewport" content="width=device-width,initial-scale=1">
     <meta name="turbo-root" content="/harpy">
-    <meta name="turbo-cache-control" content="no-cache" data-turbo-track="reload" data-track-token="3.6.0.786641302911">
+    <meta name="turbo-cache-control" content="no-cache" data-turbo-track="reload" data-track-token="3.6.0.786641633287">
 
     <!-- See retype.com -->
     <meta name="generator" content="Retype 3.6.0">
@@ -29,11 +29,11 @@
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     <link href="/harpy/static/favicon.png" rel="icon">
-    <link href="/harpy/resources/css/retype.css?v=3.6.0.786641302911" rel="stylesheet">
+    <link href="/harpy/resources/css/retype.css?v=3.6.0.786641633287" rel="stylesheet">
 
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+    <script data-cfasync="false" src="/harpy/resources/js/config.js?v=3.6.0.786641633287" data-turbo-eval="false" defer></script>
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+    <script id="lunr-js" data-cfasync="false" src="/harpy/resources/js/lunr.js?v=3.6.0.786641633287" data-turbo-eval="false" defer></script>
 </head>
 <body>
     <div id="docs-app" class="relative text-base antialiased text-gray-700 bg-white font-body dark:bg-dark-850 dark:text-dark-300">
@@ -50,11 +50,11 @@
                     <div class="flex items-center px-2 md:px-6">
                         <a id="docs-site-logo" href="/harpy/" class="flex items-center leading-snug text-2xl">
                             <span class="w-10 mr-2 grow-0 shrink-0 overflow-hidden">
-                                <img class="max-h-10 dark:hidden md:inline-block" src="/harpy/static/logo_navbar.png">
-                                <img class="max-h-10 hidden dark:inline-block" src="/harpy/static/logo_navbar.png">
+                                <img class="max-h-10 dark:hidden md:inline-block" src="/harpy/static/favicon.png">
+                                <img class="max-h-10 hidden dark:inline-block" src="/harpy/static/favicon.png">
                             </span>
                             <span class="dark:text-white font-semibold line-clamp-1 md:line-clamp-2">Harpy</span>
-                        </a><span class="hidden px-2 py-1 ml-4 text-sm font-semibold leading-none text-root-logo-label-text bg-root-logo-label-bg rounded-sm md:inline-block">v1.13</span>
+                        </a><span class="hidden px-2 py-1 ml-4 text-sm font-semibold leading-none text-root-logo-label-text bg-root-logo-label-bg rounded-sm md:inline-block">v1.2.0</span>
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@@ -95,7 +95,7 @@
                                 </a>
                             </li>
                             <li class="mr-6">
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@@ -114,16 +114,6 @@
                                     <span>Submit an Issue</span>
                                 </a>
                             </li>
-                            <li class="mr-6">
-                                <a class="py-2 md:mb-0 inline-flex items-center text-sm whitespace-nowrap transition-colors duration-200 ease-linear md:text-blue-500 dark:text-blue-400 hover:text-blue-800 dark:hover:text-blue-200" href="/harpy/development/">
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-                                    </svg>
-                                    <span>Development</span>
-                                </a>
-                            </li>
 
                         </ul>
                     </nav>
@@ -229,7 +219,7 @@
                                         </a>
                                     </li>
                                     <li class="mr-6">
-                                        <a class="block py-1 inline-flex items-center text-sm whitespace-nowrap transition-colors duration-200 ease-linear md:text-blue-500 dark:text-blue-400 hover:text-blue-800 dark:hover:text-blue-200" href="/harpy/blog/">
+                                        <a class="block py-1 inline-flex items-center text-sm whitespace-nowrap transition-colors duration-200 ease-linear md:text-blue-500 dark:text-blue-400 hover:text-blue-800 dark:hover:text-blue-200" href="/harpy/blog/" target="_blank">
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@@ -248,16 +238,6 @@
                                             <span>Submit an Issue</span>
                                         </a>
                                     </li>
-                                    <li class="mr-6">
-                                        <a class="block py-1 inline-flex items-center text-sm whitespace-nowrap transition-colors duration-200 ease-linear md:text-blue-500 dark:text-blue-400 hover:text-blue-800 dark:hover:text-blue-200" href="/harpy/development/">
-                                            <svg xmlns="http://www.w3.org/2000/svg" class="mb-px mr-1" width="18" height="18" viewBox="0 0 24 24" role="presentation">
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-                                                </g>
-                                            </svg>
-                                            <span>Development</span>
-                                        </a>
-                                    </li>
 
                                 </ul>
                             </nav>

diff --git a/blog/feed.xml b/blog/feed.xml
@@ -5,49 +5,25 @@
     <link>https://pdimens.github.io/harpy/blog/</link>
     <description>Blog</description>
     <copyright>© Copyright 2024. All rights reserved.</copyright>
-    <lastBuildDate>Tue, 05 Nov 2024 00:00:00 GMT</lastBuildDate>
+    <lastBuildDate>Fri, 21 Jun 2024 00:00:00 GMT</lastBuildDate>
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     <atom:link rel="self" type="application/rss+xml" href="https://pdimens.github.io/harpy/blog/feed.xml" />
     <image>
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       <link>https://pdimens.github.io/harpy/blog/</link>
       <url>https://pdimens.github.io/harpy/favicon.png</url>
     </image>
-    <item>
-      <title> Sort data by barcode</title>
-      <guid isPermaLink="true">https://pdimens.github.io/harpy/blog/sort_by_barcode/</guid>
-      <description>Sorting data by linked-read barcode</description>
-      <author>Pavel Dimens</author>
-      <pubDate>Tue, 05 Nov 2024 00:00:00 GMT</pubDate>
-      <category domain="https://pdimens.github.io/harpy/categories/guides/">guides</category>
-    </item>
-    <item>
-      <title> Simulating variants</title>
-      <guid isPermaLink="true">https://pdimens.github.io/harpy/blog/simulate_diploid/</guid>
-      <description>A realistic workflow to simulate variants</description>
-      <author>Pavel Dimens</author>
-      <pubDate>Mon, 30 Sep 2024 00:00:00 GMT</pubDate>
-      <category domain="https://pdimens.github.io/harpy/categories/guides/">guides</category>
-    </item>
-    <item>
-      <title> Pooling samples for SV calling</title>
-      <guid isPermaLink="true">https://pdimens.github.io/harpy/blog/sv_pooling/</guid>
-      <description>Why pool samples for SV calling and when to do it</description>
-      <author>Pavel Dimens</author>
-      <pubDate>Thu, 01 Aug 2024 00:00:00 GMT</pubDate>
-      <category domain="https://pdimens.github.io/harpy/categories/guides/">guides</category>
-    </item>
     <item>
       <title> Choosing a software runtime method</title>
-      <guid isPermaLink="true">https://pdimens.github.io/harpy/blog/software_environments/</guid>
+      <guid isPermaLink="true">https://pdimens.github.io/harpy/blog/softwareenvironments/</guid>
       <description>Deciding between using Conda or Containers</description>
       <author>Pavel Dimens</author>
       <pubDate>Fri, 21 Jun 2024 00:00:00 GMT</pubDate>
       <category domain="https://pdimens.github.io/harpy/categories/guides/">guides</category>
     </item>
     <item>
       <title> Filtering Variants</title>
-      <guid isPermaLink="true">https://pdimens.github.io/harpy/blog/filtering_snps/</guid>
+      <guid isPermaLink="true">https://pdimens.github.io/harpy/blog/filteringsnps/</guid>
       <description>A gentle introduction to the wild world of filtering SNPs</description>
       <author>Pavel Dimens</author>
       <pubDate>Wed, 05 Jun 2024 00:00:00 GMT</pubDate>