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typo in doccs (#15)
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Co-authored-by: pegerto-fernandez-ck <pegerto.fernandez@creditkarma.com>
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pegerto and pegerto-ck authored Nov 21, 2023
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1 change: 1 addition & 0 deletions docs/source/api.rst
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API Documentation
=================
This section describe the MDA Kit API

.. autosummary::
:toctree: autosummary
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mdakit\_sasa.analysis.sasaanalysis
mdakit\_sasa.analysis.sasaanalysis
==================================

.. automodule:: mdakit_sasa.analysis.sasaanalysis
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4 changes: 2 additions & 2 deletions docs/source/getting_started.rst
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Installation
------------

This sofware can be installed from sources using the documentation under `github`_, alterantive using a python package manager.
This sofware can be installed from source using the documentation under `github`_, alterantive using a python package manager.


Using `Pip`_ ::
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SASA for a trajectory
SASA analisys
---------------------

If you already familiar with MDAnaysis the first steps are simple::
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7 changes: 5 additions & 2 deletions docs/source/index.rst
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Welcome to mdakit-sasa's documentation!
=========================================================

This MDAKit allows enables the calculation of Solvant Accessible Surface Area ( SASA) with MDAnaysis.
This MDAKit module facilitates the calculation of Solvant Accessible Surface Area (SASA) using MDAnaysis.

.. note::
The underline calculation and algorithm implementation is based on Freesasa, by Simon Mitternacht (2016) FreeSASA: An open source C library for solvent accessible surface area calculation. F1000Research 5:189 (doi: 10.12688/f1000research.7931.1)

This software enable the calculation to be store for a trajectory and seamlessly integrates FreeSASA into MDAnaysis.


This kit is a standalone package that utilizes MDAnalysis components to addresss the specific calculation of the solvant accessible area during a molecular dynamics simulatio.


.. toctree::
:maxdepth: 2
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5 changes: 4 additions & 1 deletion mdakit_sasa/analysis/sasaanalysis.py
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SASAAnalysis --- :mod:`mdakit_sasa.analysis.SASAAnalysis`
===========================================================
This module contains the :class:`SASAAnalysis` class.
This module contains the :class:`SASAAnalysis` class, this class follow
the standarised :class:`AnalysisBase` that will be familiar for MDAnalisys users.
This module is the entry point for this MDA Kit.
"""
from typing import Union, TYPE_CHECKING
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