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Merge pull request #1523 from I-Bouros/rt-notebook-new
Rt Notebook example - corrected
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examples/miscellaneous/model-rt-estimation-renewal-equation.ipynb
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Original file line number | Diff line number | Diff line change |
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,Time Points,Mean,Median,Lower bound CI,Upper bound CI,Central Probability | ||
0,7,6.851351999492065,6.136387501726331,1.686252653977923,15.38240615556736,0.95 | ||
1,8,7.618165371882501,7.152484501254506,2.557113873799544,15.508937816677712,0.95 | ||
2,9,7.870754054689776,7.4475099106056835,3.0271497413615345,15.44027429868353,0.95 | ||
3,10,6.135900327304794,5.749526588347118,2.2612108957718315,11.927851204375362,0.95 | ||
4,11,5.631640388851766,5.273006073926375,2.501526461154174,10.822379461340946,0.95 | ||
5,12,5.202017323135449,4.905288634956683,2.313941160249185,9.479491262383847,0.95 | ||
6,13,3.3945489097463004,3.189700810693,1.3117652052807571,6.612621535262575,0.95 | ||
7,14,2.8168944208404203,2.648115062093469,1.127557897960739,5.620075105680762,0.95 | ||
8,15,1.7339810349433398,1.6145407536988419,0.5983056995703628,3.580894468008412,0.95 | ||
9,16,1.8579896048332776,1.74534803255417,0.7719348509947087,3.5034022415297437,0.95 | ||
10,17,1.6017029825741145,1.503256778109017,0.6488983245575115,3.0841225562338384,0.95 | ||
11,18,1.6286022874731965,1.5478529664853773,0.6929429834415883,3.0544690664965963,0.95 | ||
12,19,2.0141966732731786,1.9347875063476814,0.9389414958098956,3.5840576177434773,0.95 | ||
13,20,4.011521906144785,3.910179549074618,2.3133725674749144,6.4013316321784295,0.95 | ||
14,21,7.306387939530312,7.103410265724518,4.6468031301751065,10.805171355391819,0.95 | ||
15,22,11.600855747814075,11.4170588270357,8.00902327111398,16.447552558356062,0.95 | ||
16,23,13.39620954545914,13.166995551265305,9.326759847706917,18.427866278867143,0.95 | ||
17,24,13.795930704433694,13.534413604412801,9.511141122182025,19.8651053660296,0.95 | ||
18,25,13.75807139672613,13.482809277826785,9.575454054106196,19.65489857323722,0.95 | ||
19,26,13.193583299189042,12.954552616434201,9.001609537387445,18.711598998163883,0.95 | ||
20,27,11.278251657566912,11.026897827636127,7.580967281806349,16.511557392264052,0.95 | ||
21,28,8.390824436190368,8.201325554888678,5.615839395593753,12.188041876242513,0.95 | ||
22,29,4.70920557253456,4.568267256443287,3.178161753404539,7.0044480038029295,0.95 | ||
23,30,2.895452809961549,2.8197375898372155,1.9082206594435034,4.330841895431299,0.95 | ||
24,31,2.4516675146039852,2.3991164962153215,1.6395638710643916,3.6167581983428163,0.95 | ||
25,32,1.9254655466632646,1.8855817623478246,1.2820423096101605,2.765192969086085,0.95 | ||
26,33,1.6803263176188605,1.6409102305871888,1.1220820143214947,2.4506898776321098,0.95 | ||
27,34,1.55336609426428,1.5271212186882406,1.0313874813057284,2.374601642377911,0.95 | ||
28,35,1.397146604434209,1.3727663606200966,0.9457852728585097,1.9729289926358953,0.95 | ||
29,36,1.3672607347035013,1.3429698515339126,0.9152725438678789,1.996911344470252,0.95 | ||
30,37,1.833411043278763,1.7980553848587195,1.248668706841775,2.6446678141661812,0.95 | ||
31,38,2.2637883342299308,2.2018280476882732,1.5404011368181638,3.3227664918080277,0.95 | ||
32,39,2.6452943038476353,2.6163769304492597,1.848978269077804,3.74814971448781,0.95 | ||
33,40,2.842855350423021,2.7890934834911785,1.9619678103420444,4.054031749977523,0.95 | ||
34,41,2.923515989934385,2.8509568509642156,2.0108514307215617,4.212283678328818,0.95 | ||
35,42,2.90657365667172,2.847750575718872,2.067763133950601,4.101553306467881,0.95 | ||
36,43,2.7466794912627495,2.6792665773961555,1.909146824348301,3.8928703845514896,0.95 | ||
37,44,2.160868263221678,2.1151021935648755,1.4866572140985694,3.0473074689388913,0.95 | ||
38,45,1.6342962714280211,1.597419437225968,1.1189577437909928,2.3586835176644674,0.95 | ||
39,46,1.2362669013482346,1.2098532550039502,0.8353735519174988,1.8047859631252827,0.95 | ||
40,47,0.9384486749482064,0.9281051361632563,0.6460128795810736,1.3365419996545842,0.95 | ||
41,48,0.7560901195609815,0.7366688413780544,0.5256428916421325,1.109197068797789,0.95 | ||
42,49,0.7220705724073395,0.7007500998245935,0.49244967219532176,1.0581882314861812,0.95 | ||
43,50,0.7294591497836475,0.7140370975472894,0.4886195336707719,1.0698588677223164,0.95 | ||
44,51,0.6998557379548004,0.6839860503427797,0.4766652265195109,1.0097980030657925,0.95 | ||
45,52,0.6779020435896196,0.6617186415305595,0.4709986196074829,0.9616968849121016,0.95 | ||
46,53,0.6590748444695341,0.644362828478197,0.447853208968517,0.9650443788833042,0.95 | ||
47,54,0.6355076898963806,0.621912271173622,0.4265763828434628,0.9201631376048649,0.95 | ||
48,55,0.6521535755668805,0.6357417263030853,0.4321088335559044,0.9680542836020063,0.95 | ||
49,56,0.6227005847380818,0.6078852870264624,0.41763518204388,0.9316930058062136,0.95 | ||
50,57,0.5861631187076994,0.5693850328788272,0.3863144876451755,0.8891095973297768,0.95 | ||
51,58,0.5240015716196982,0.5096467968782443,0.3497654806003788,0.7838512403979411,0.95 | ||
52,59,0.532307255268853,0.5180817805674782,0.35843818303086167,0.7753941790913876,0.95 | ||
53,60,0.5587978950504778,0.5436943817160123,0.37320501749034757,0.822142100490845,0.95 | ||
54,61,0.5499495196028048,0.5348411951691721,0.3636874907384612,0.8069459105975895,0.95 | ||
55,62,0.5583914052630193,0.5452993145434603,0.3613838978160446,0.8605899271969047,0.95 | ||
56,63,0.5837471453398306,0.5692612903816661,0.3781810679641882,0.8693365837533439,0.95 | ||
57,64,0.5580111407184319,0.5470293413779459,0.3750005210849204,0.8026026190823623,0.95 | ||
58,65,0.5399781075541532,0.5282272257431562,0.35323305198621746,0.8122643263429055,0.95 | ||
59,66,0.5145679037606831,0.5000948567731178,0.33462723431783586,0.75811651787852,0.95 | ||
60,67,0.4987556752872063,0.48556607025546233,0.3243572877993023,0.7637891789491984,0.95 | ||
61,68,0.5502239539078235,0.5389541668801232,0.35251036457304497,0.8366320864153807,0.95 | ||
62,69,0.5489533964286766,0.5347228588392078,0.3532350592217418,0.8194758733423552,0.95 | ||
63,70,0.5687626038489894,0.5494461308917722,0.36530311045422764,0.8598031831153826,0.95 | ||
64,71,0.6018881917637543,0.5848683237335426,0.38940806295980745,0.9049938593846518,0.95 | ||
65,72,0.744602973677761,0.7212623529753797,0.48149019597888226,1.1215294921393815,0.95 | ||
66,73,0.721677680068264,0.7105397606212376,0.4470719733012058,1.0919524718329017,0.95 | ||
67,74,0.7559462726735642,0.7369925740957903,0.48435723858307594,1.1316134740438408,0.95 | ||
68,75,0.6938971366993639,0.6703691142726689,0.44361125931125006,1.0824600992764637,0.95 | ||
69,76,0.6411311868006632,0.6241938236290434,0.4041312565456497,0.9874582451758377,0.95 | ||
70,77,0.5762647935632041,0.562327474093611,0.3454914985184998,0.9042795199912154,0.95 | ||
71,78,0.6007321761465356,0.5805997460902028,0.36767873357514896,0.927874539475927,0.95 | ||
72,79,0.49377415538163316,0.4823201204291102,0.28657112780214755,0.7827635649526501,0.95 | ||
73,80,0.5436322990665936,0.5292606614596895,0.320373293200342,0.8649775941164674,0.95 | ||
74,81,0.5131121348833074,0.4976061235191354,0.2945337607518473,0.8187292020601525,0.95 | ||
75,82,0.6531523079361218,0.6351107973032815,0.3815145547432355,1.0416229330220677,0.95 | ||
76,83,0.6528052991427843,0.6311298442411963,0.391584960257644,1.0075376816383679,0.95 | ||
77,84,0.6713857951287833,0.6519231595933397,0.39172684438647754,1.0660400872483602,0.95 | ||
78,85,0.6240157997459003,0.604499200546838,0.3688828949097327,1.0120930003373967,0.95 | ||
79,86,0.7015486956897861,0.677026762078427,0.40619938144033096,1.1405910094328915,0.95 | ||
80,87,0.6985212096045393,0.6813454169969766,0.4028685233037967,1.1130094635031658,0.95 | ||
81,88,0.7092013753998874,0.6864488491808219,0.4090088673356588,1.1704401044441193,0.95 | ||
82,89,0.6425766023372105,0.6183852151939938,0.35717236942777997,1.052973899165087,0.95 | ||
83,90,0.7096070339754095,0.6768979104446636,0.39227988276660475,1.180799179748232,0.95 | ||
84,91,0.6751082757043918,0.6489670607794822,0.37151018923352913,1.1500718023396441,0.95 | ||
85,92,0.7041914805153637,0.6809525074514379,0.3884771605299663,1.1582595639763487,0.95 | ||
86,93,0.5611856373709946,0.5393855262265639,0.2871807078535077,0.9595767792835561,0.95 | ||
87,94,0.5214093188185296,0.495817400868625,0.24690123244401943,0.9196964523409502,0.95 | ||
88,95,0.5574437562275331,0.5308472196203967,0.2802540372493299,0.9893605856066033,0.95 | ||
89,96,0.5434806967243156,0.5103410092189604,0.2654866438130055,1.032441863091827,0.95 | ||
90,97,0.5059174770868792,0.4800556026489314,0.23827632526485415,0.9253338854575253,0.95 | ||
91,98,0.5298544435789343,0.5069866253979611,0.2538942846189618,0.9462623772289225,0.95 | ||
92,99,0.5224586440933112,0.5013486207662011,0.25370414377955697,0.9228447234705054,0.95 | ||
93,100,0.6120354296630599,0.5840590785687971,0.2844240752904155,1.1057715054321313,0.95 | ||
94,101,0.6401415137033595,0.5992774014079141,0.2978645378976517,1.1814373480068356,0.95 | ||
95,102,0.5826772599201773,0.5518605828094243,0.24573438393976746,1.1101302095653514,0.95 | ||
96,103,0.513740465041276,0.4865459132104617,0.20213408505767702,0.9750340148407196,0.95 | ||
97,104,0.4882247414149966,0.45293796065035874,0.18372688258290776,1.0428317243773813,0.95 | ||
98,105,0.6014213976917796,0.5599491040706857,0.23216297084671,1.2158313985871532,0.95 | ||
99,106,0.5522239482997511,0.5082963809610102,0.21298531139257848,1.1251718175686487,0.95 |
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Original file line number | Diff line number | Diff line change |
---|---|---|
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,Time Points,Mean,Median,Lower bound CI,Upper bound CI,Central Probability | ||
0,7,6.52974688386283,6.149553819098205,1.7694692430674586,13.414468289381015,0.95 | ||
1,8,7.3772355715673115,7.079231777195094,2.785560976226629,13.89539286614282,0.95 | ||
2,9,7.6699996317472126,7.348550892642702,3.4480438190787672,13.50838968407027,0.95 | ||
3,10,6.064789510054981,5.8103635977840575,2.4696001624401105,11.372009912025744,0.95 | ||
4,11,5.423101414196482,5.135116726394212,2.402718251635486,9.729608057994456,0.95 | ||
5,12,4.813628826767605,4.672199024647202,2.3570853006158208,7.8673250044521605,0.95 | ||
6,13,3.0676873901857955,2.936674059242593,1.3187885271642867,5.619736301611973,0.95 | ||
7,14,2.5237780872388886,2.392248677959614,1.0716843218485927,4.584158815578486,0.95 | ||
8,15,1.5417624278204909,1.4495600552828238,0.5401036254339731,2.982285768828518,0.95 | ||
9,16,1.7144602184998887,1.6595126239891618,0.721347665697306,3.0140687456031725,0.95 | ||
10,17,1.5217633224346288,1.471844321319956,0.647446374804393,2.6537742419661425,0.95 | ||
11,18,1.5679493062863854,1.5129593557968446,0.7288905063446244,2.6825394353674517,0.95 | ||
12,19,1.9249747787160147,1.8748826405602435,0.9591846623595198,3.1184942454203552,0.95 | ||
13,20,3.928279011981372,3.8756557242703504,2.5457609166917377,5.571841877892265,0.95 | ||
14,21,7.254634287159036,7.208064155115164,5.276928880246017,9.410752496900972,0.95 | ||
15,22,12.154242947892994,12.119574147558819,9.59010122547027,14.8117587860813,0.95 | ||
16,23,14.395258000000622,14.32487930277557,11.698275281734333,17.367721286458355,0.95 | ||
17,24,13.481354455494106,13.451437360131916,11.08480503072759,16.12153882378409,0.95 | ||
18,25,11.345933306752118,11.312359199947895,9.487471127071128,13.317937442277469,0.95 | ||
19,26,8.558629312353142,8.556566798094856,7.2201909906367545,9.95078803069641,0.95 | ||
20,27,5.947321371111171,5.934844319648251,5.091443312317833,6.884022848174657,0.95 | ||
21,28,4.305491542204678,4.297038909585032,3.6279024383210774,5.03052584345767,0.95 | ||
22,29,2.9481869539984737,2.9409398728282516,2.4676949949432814,3.4640934243938983,0.95 | ||
23,30,2.3189442680574817,2.3095294284589367,1.9709508439773453,2.7056551855050492,0.95 | ||
24,31,2.0856887088511393,2.0824730125927187,1.777308412533048,2.441802761199848,0.95 | ||
25,32,1.7145050531324662,1.7128771261183504,1.4503417053495573,1.9878092912882663,0.95 | ||
26,33,1.5297461065442917,1.526260650607969,1.304665769469472,1.7717608319593083,0.95 | ||
27,34,1.4221896383352426,1.41463051062204,1.2247323702700355,1.6465046241006718,0.95 | ||
28,35,1.2933830562322859,1.2885213089523573,1.086261214826961,1.5045538167847843,0.95 | ||
29,36,1.2812798083476504,1.2769543497750764,1.097929011881449,1.4883144458957958,0.95 | ||
30,37,1.7922033130892268,1.7887129035250595,1.569279466347869,2.0236093390957417,0.95 | ||
31,38,2.221121143730807,2.215730116226276,1.9817846848108807,2.485349766001869,0.95 | ||
32,39,2.568723915257387,2.5652898445584453,2.3059549865404305,2.854363799896902,0.95 | ||
33,40,2.737412032224454,2.7358200794286613,2.4646868518376337,3.0218260375924544,0.95 | ||
34,41,2.779013726223814,2.7752947044282674,2.5317405332951153,3.034275267647301,0.95 | ||
35,42,2.6242089103532202,2.6234558102199914,2.377160392024499,2.8748082745674477,0.95 | ||
36,43,2.329051437365562,2.3242146686725107,2.115767984696302,2.546785386447394,0.95 | ||
37,44,1.771082445009084,1.770432916285814,1.5959171097774356,1.9577520698697692,0.95 | ||
38,45,1.3117145007453157,1.3095906605385255,1.1798760843487086,1.4548865399437987,0.95 | ||
39,46,1.0229440478903056,1.020748856197415,0.9036930436562625,1.1486750456953445,0.95 | ||
40,47,0.8246320046437169,0.8228149412666957,0.7237615595092728,0.9302476118316835,0.95 | ||
41,48,0.7021595342797922,0.702005540793004,0.609215241380952,0.7961077947658385,0.95 | ||
42,49,0.6699698431189559,0.669950156258565,0.5884392253189065,0.7589181790826508,0.95 | ||
43,50,0.68388584445841,0.6831796527608394,0.5970724594322743,0.7758566939059753,0.95 | ||
44,51,0.6560161830448907,0.6563020305055067,0.575690484397519,0.7444268225540802,0.95 | ||
45,52,0.6348118843344784,0.63372495103133,0.5502423889678406,0.7251985648078455,0.95 | ||
46,53,0.6181508405554409,0.6170101112250768,0.5393203064968053,0.7018694754907376,0.95 | ||
47,54,0.6063839761378212,0.606018889431366,0.5195559715210519,0.6957722638218207,0.95 | ||
48,55,0.6188783587046672,0.6175565967396416,0.5338001906534845,0.711621220930265,0.95 | ||
49,56,0.5940791389543568,0.5927571333995878,0.5064412086119228,0.6854767196459244,0.95 | ||
50,57,0.5528027827718595,0.5515538912550283,0.46932746609082926,0.6438923648070763,0.95 | ||
51,58,0.49511522771111677,0.4941737437441014,0.4181596566160605,0.5844307223852,0.95 | ||
52,59,0.4999610627725652,0.49943362107034706,0.4159200220275033,0.592114290950947,0.95 | ||
53,60,0.5238505286477013,0.522662314063209,0.4348146401249654,0.6231378692817003,0.95 | ||
54,61,0.5206029815779106,0.5196579503786944,0.42918047512109975,0.6183929640567506,0.95 | ||
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82,89,0.6062481284426078,0.5944770964705157,0.3682061892024694,0.9066651308201965,0.95 | ||
83,90,0.6629398006937008,0.6542560033999179,0.43233001678248173,0.9132662341841328,0.95 | ||
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85,92,0.6636982353615051,0.6553472215631144,0.43021335048563547,0.962176664088525,0.95 | ||
86,93,0.5388292894917898,0.5275833383689944,0.3168019545784403,0.8180118269013176,0.95 | ||
87,94,0.4940647389956664,0.4819228916803771,0.27541750766287865,0.7844418517140584,0.95 | ||
88,95,0.52433548328158,0.5095110503844215,0.29936794377096526,0.8212318057717408,0.95 | ||
89,96,0.5084422209355194,0.49585970373314525,0.27322801921127904,0.8244663877734003,0.95 | ||
90,97,0.4645916311684229,0.45448709122715947,0.24281613634572974,0.749191216505325,0.95 | ||
91,98,0.49720061910804375,0.48260476958533505,0.2512391653875757,0.8351261002828634,0.95 | ||
92,99,0.4855803166886395,0.4727050426228703,0.24249166173578102,0.8166296183008022,0.95 | ||
93,100,0.5644680090432748,0.548058564206469,0.2883603087122838,0.925027702908244,0.95 | ||
94,101,0.6119631221966944,0.5986692753595364,0.32727695921981903,1.003780045081513,0.95 | ||
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96,103,0.47469457925319103,0.4503024738319581,0.21277300652854886,0.8748729121868616,0.95 | ||
97,104,0.4475583254051142,0.42873725128027546,0.1797995586946553,0.8241828465325746,0.95 | ||
98,105,0.5512562177897949,0.5309581364076179,0.24705537926075763,0.9725335237315377,0.95 | ||
99,106,0.5154872571726565,0.49164340905949133,0.22652548651219512,0.9283987859514712,0.95 |
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