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adjust FA stats file path for outlier analysis
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tashrifbillah committed May 28, 2020
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6 changes: 4 additions & 2 deletions docs/IO_TUTORIAL.md
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Expand Up @@ -471,8 +471,10 @@ See [documentation](./TUTORIAL.md) for details about them.
* See details at https://github.com/pnlbwh/freesurfer-analysis

* Analyze statistics
> /data/pnl/soft/pnlpipe3/freesurfer-analysis/scripts/generate-summary.py -i path/to/stats/FA_combined_roi_avg.csv
-o /tmp/tbss-FA-stats/
```
tudir
/data/pnl/soft/pnlpipe3/freesurfer-analysis/scripts/generate-summary.py -i enigma-tbss/stats/FA_combined_roi_avg.csv -o /tmp/FA-outliers/
```

* View outlier summary
> firefox http://localhost:8050/
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