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Update pgxRpi.md
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hangjiaz authored Aug 5, 2024
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Expand Up @@ -60,7 +60,7 @@ cnv_fraction_across_bin <- pgxLoader(type="cnv_fraction", filters = "NCIT:C2948"

## Query and visualize CNV frequencies

You can query the CNV frequency of specific filters. There are two available data formats. One is [`.pgxfreq`](https://docs.progenetix.org/file-formats/#pgxfreq-segment-cnv-frequencies). Another is [`.pgxmatrix`]([https://docs.progenetix.org/services/#cnv-frequency-matrix].
You can query the CNV frequency of specific filters. There are two available data formats. One is [".pgxfreq"](https://docs.progenetix.org/file-formats/#pgxfreq-segment-cnv-frequencies). Another is [".pgxmatrix"](https://docs.progenetix.org/services/#cnv-frequency-matrix).

```
frequency <- pgxLoader(type="cnv_frequency", output ='pgxfreq',
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