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Signed-off-by: Peter Solymos <psolymos@gmail.com>
psolymos · May 20, 2024 · 0ab8526 · 0ab8526
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diff --git a/.github/workflows/check.yml b/.github/workflows/check.yml
@@ -10,7 +10,7 @@ jobs:
     runs-on: macOS-latest
     steps:
       - name: Checkout repo
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
 
       - name: R setup
         uses: r-lib/actions/setup-r@v2

diff --git a/vignettes/bsims01-intro.Rmd b/vignettes/bsims01-intro.Rmd
@@ -28,6 +28,10 @@ is designed to allow rapid interactive exploration (via **shiny** apps)
 and efficient simulation (supporting various parallel backends),
 thus elevating the user experience.
 
+Read more in the paper:
+
+Solymos, P. 2023. Agent-based simulations improve abundance estimation. _Biologia Futura_ 74, 377--392 [DOI 10.1007/s42977-023-00183-2](https://doi.org/10.1007/s42977-023-00183-2), [link to PDF](https://rdcu.be/doDwI).
+
 The goals of the package are to: 
 
 1. allow easy _testing of statistical assumptions_ and explore 

diff --git a/vignettes/bsims02-layers.Rmd b/vignettes/bsims02-layers.Rmd
@@ -660,3 +660,6 @@ Deviations from the assumptions and bias in density estimation
 can be done by systematically evaluating the simulations settings,
 which we describe in the next section.
 
+Read more in the paper:
+
+Solymos, P. 2023. Agent-based simulations improve abundance estimation. _Biologia Futura_ 74, 377--392 [DOI 10.1007/s42977-023-00183-2](https://doi.org/10.1007/s42977-023-00183-2), [link to PDF](https://rdcu.be/doDwI).
diff --git a/vignettes/bsims03-workflow.Rmd b/vignettes/bsims03-workflow.Rmd
@@ -203,3 +203,7 @@ get_counts <- function(b) {
 x$y <- sapply(bb, get_counts)
 x
 ```
+
+Read more in the paper:
+
+Solymos, P. 2023. Agent-based simulations improve abundance estimation. _Biologia Futura_ 74, 377--392 [DOI 10.1007/s42977-023-00183-2](https://doi.org/10.1007/s42977-023-00183-2), [link to PDF](https://rdcu.be/doDwI).